Information for 13-WAMTTTATGTTC (Motif 11)

C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
Reverse Opposite:
T C A G C T G A C T G A A G T C T C G A A G C T C G T A G T C A T C G A C A T G A G C T G C T A
p-value:1e-19
log p-value:-4.575e+01
Information Content per bp:1.803
Number of Target Sequences with motif192.0
Percentage of Target Sequences with motif36.85%
Number of Background Sequences with motif38.0
Percentage of Background Sequences with motif10.41%
Average Position of motif in Targets147.1 +/- 22.5bp
Average Position of motif in Background2953412.8 +/- 3317206.3bp
Strand Bias (log2 ratio + to - strand density)7.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

cad/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:WAMTTTATGTTC
---TTTATG---
 C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T

RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:WAMTTTATGTTC
TWWTTTCTGTTG
 C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
C A G T C G T A C G T A G C A T G A C T G C A T G T A C A G C T A C T G G A C T A C G T C A T G

dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-WAMTTTATGTTC
THACTTTTTN---
 A C G T C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
G A C T G C T A T G C A A G T C A C G T A C G T A C G T C G A T A C G T A T C G A C G T A C G T A C G T

At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----WAMTTTATGTTC
WWWTWACTTTTT----
 A C G T A C G T A C G T A C G T C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
G C A T G C T A C G T A A G C T G C T A T G C A A G T C A C G T A C G T A C G T G C A T G C A T A C G T A C G T A C G T A C G T

lin-14/MA0261.1/Jaspar

Match Rank:5
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:WAMTTTATGTTC
------GTGTTC
 C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C T G A C G T A C G T A G T C

MA0261.1_lin-14/Jaspar

Match Rank:6
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:WAMTTTATGTTC
------GTGTTC
 C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C T G A C G T A C G T A G T C

ETR-1(RRM)/Caenorhabditis_elegans-RNCMPT00183-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:WAMTTTATGTTC
---TTTGTGT--
 C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C G T

AT1G47655/MA1275.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-WAMTTTATGTTC
TTACTTTTTNN--
 A C G T C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
G A C T G A C T T C G A A G T C A G C T A C G T A C G T G C A T G A C T A T G C A G C T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WAMTTTATGTTC----
-NNTTTNTTTTNGNNN
 C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C A C G T A C G T A C G T A C G T
A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-WAMTTTATGTTC
YHACTTTTTS---
 A C G T C G A T T C G A G T A C A G C T A C G T G C A T T C G A A G C T C T A G A G C T A G C T A G T C
G A T C G C A T T C G A A G T C A C G T A C G T A C G T C G A T A C G T A T C G A C G T A C G T A C G T