Information for 21-TCCASCCAATTG (Motif 18)

A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
Reverse Opposite:
A G T C G C T A C T G A A C G T C G A T C T A G A T C G A T G C A G C T C T A G C T A G G T C A
p-value:1e-12
log p-value:-2.902e+01
Information Content per bp:1.767
Number of Target Sequences with motif225.0
Percentage of Target Sequences with motif43.19%
Number of Background Sequences with motif73.6
Percentage of Background Sequences with motif20.18%
Average Position of motif in Targets339.5 +/- 92.6bp
Average Position of motif in Background3297283.0 +/- 3339646.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCCASCCAATTG-
---AGCCAATCGG
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

HAP2/Literature(Harbison)/Yeast

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCCASCCAATTG
-----CCAAT--
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T

HAP3/Literature(Harbison)/Yeast

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCCASCCAATTG
-----CCAAT--
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T

HAP5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCCASCCAATTG
-----CCAAT--
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T

HAP5(MacIsaac)/Yeast

Match Rank:5
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCCASCCAATTG
-----CCAAT--
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T

HAP3(MacIsaac)/Yeast

Match Rank:6
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCCASCCAATTG
-----CCAAT--
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCASCCAATTG
ACTAGCCAATCA
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCASCCAATTG
TTCCCGCCAA---
 A C G T A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
G C A T A C G T A G T C A T G C A G T C C T A G T A G C G T A C C T G A G C T A A C G T A C G T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCCASCCAATTG-
-NTGGCCAATGAG
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G A C G T
A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCASCCAATTG
-BCAGACWA---
 A C G T A G T C A G T C C T G A A T C G T A G C A G T C C G T A C G T A A G C T C G A T C T A G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T