Information for 24-CCTTYSCMTCTA (Motif 24)

T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
Reverse Opposite:
C G A T G T C A A C T G C G T A C A T G C A T G A T C G T C G A T C G A C T G A T C A G A T C G
p-value:1e0
log p-value:-1.423e-03
Information Content per bp:1.532
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif26.30%
Number of Background Sequences with motif129.9
Percentage of Background Sequences with motif35.60%
Average Position of motif in Targets44.9 +/- 23.9bp
Average Position of motif in Background3439816.1 +/- 3280128.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PCBP1(KH)/Mus_musculus-RNCMPT00239-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTYSCMTCTA
CCTTTCCC----
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A G T C G T A C G A C T C G A T C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T

PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTTYSCMTCTA
-CTTTCCCT---
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A C G T G T A C G A C T C G A T C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T

RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTTYSCMTCTA
--TTCCCCT---
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A C G T A C G T C G A T A G C T A G T C A G T C A G T C G T A C A G C T A C G T A C G T A C G T

PCBP2(KH)/Homo_sapiens-RNCMPT00044-PBM/HughesRNA

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTTYSCMTCTA
CCTTCCC-----
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A G T C A G T C A G C T G A C T G A T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

Wt1/MA1627.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTTYSCMTCTA
CCCCTCCCCCACAC
 A C G T A C G T T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
G A T C A G T C G T A C T A G C C A G T A T G C A G T C A G T C G T A C A T G C C T G A A T G C T G C A A G T C

TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTTYSCMTCTA--
NNNWCCTCCTCHHNN
 A C G T T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A A C G T A C G T
C A G T G C A T G A T C G C A T G A T C G A T C G A C T G T A C G T A C G A C T G A T C G A C T G A C T A G T C G A T C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTTYSCMTCTA
-TTCCCCCTAC-
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

PCBP1(KH)/Homo_sapiens-RNCMPT00186-PBM/HughesRNA

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTTYSCMTCTA
CCTTTCC-----
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A G T C G T A C G C A T C G A T G C A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Znf281/MA1630.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCTTYSCMTCTA
CCTCCCCCACC-
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A G T C G T A C C A G T T G A C T A G C A T G C A T G C A T G C T C G A A T G C G A T C A C G T

NDD1(MacIsaac)/Yeast

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTTYSCMTCTA
--TTTCCCCTTT
 T A G C A G T C G A C T A G C T A G C T T A G C G T A C G T A C G C A T T G A C C A G T G C T A
A C G T A C G T G A C T A G C T A C G T T A G C A G T C G A T C A G T C G A C T G A C T A G C T