Information for 9-AGTGTACY (Motif 27)

C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C
Reverse Opposite:
C T A G A C T G A C G T C G T A A G T C C T G A A G T C A G C T
p-value:1e0
log p-value:-0.000e+00
Information Content per bp:1.906
Number of Target Sequences with motif234.0
Percentage of Target Sequences with motif44.91%
Number of Background Sequences with motif241.2
Percentage of Background Sequences with motif66.10%
Average Position of motif in Targets453.9 +/- 87.9bp
Average Position of motif in Background3395731.7 +/- 3519916.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAL13P1.35(RRM)/Plasmodium_falciparum-RNCMPT00234-PBM/HughesRNA

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AGTGTACY
-GTGTAAT
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C
A C G T A C T G A C G T A C T G A G C T C G T A G C T A A G C T

AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AGTGTACY----
GGTGCACCDWAA
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C A T G T C A G G C A T T C A G A G T C C G T A A G T C T A G C C G A T G C A T G T C A C G T A

SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AGTGTACY-
-BTGTACTT
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C A C G T
A C G T A G C T G A C T A C T G A C G T G T C A A G T C A C G T C G A T

SPL9/MA1322.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGTGTACY---
ATTGTACGGAT
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T
G T C A G C A T A G C T A C T G C G A T G T C A A G T C A C T G C A T G G C T A G A C T

Lm_0223(RRM)/Leishmania_major-RNCMPT00223-PBM/HughesRNA

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGTGTACY
CGTGTAA-
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C
A G T C A C T G A C G T A C T G C G A T C G T A G T C A A C G T

SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGTGTACY---
-YTGTACTTBH
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T G A C T G A C T A T C G C G A T G T C A G T A C A G C T C G A T A C G T G T A C

AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGTGTACY
AGTGWSMH
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C
C G T A A T C G A C G T A C T G C G T A T A C G T G C A G A C T

SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGTGTACY----
WHTGTACKKWHW
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
G C A T G C A T G A C T A C T G A C G T C G T A A G T C A C T G C A T G C G T A G C A T G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGTGTACY---
-CTGTTCCTGG
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PUM(PUF)/Drosophila_melanogaster-RNCMPT00104-PBM/HughesRNA

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGTGTACY-
--TGTAAAT
 C T G A A C T G A G C T A C T G A C G T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C T G A C G T C G T A G T C A C G T A A C G T