Information for 4-CTTATACTGGTC (Motif 4)

G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
Reverse Opposite:
T C A G C T G A A G T C A G T C C G T A T C A G A G C T C T G A A C G T C T G A T G C A C T A G
p-value:1e-42
log p-value:-9.713e+01
Information Content per bp:1.941
Number of Target Sequences with motif211.0
Percentage of Target Sequences with motif40.50%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif3.47%
Average Position of motif in Targets193.7 +/- 31.0bp
Average Position of motif in Background4141708.1 +/- 3148275.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0219(RRM)/Trypanosoma_brucei-RNCMPT00219-PBM/HughesRNA

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTTATACTGGTC
-ATATACTN---
 G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T C G T A A C G T C G T A C G A T C G T A A G T C C G A T T C G A A C G T A C G T A C G T

ECM22(MacIsaac)/Yeast

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTATACTGGTC
GCTTATACGAG--
 A C G T G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C T G C G T A A C T G A C G T A C G T

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTATACTGGTC
-TTATACNC---
 G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T C G A T A C G T C G T A A C G T C G T A A G T C C A G T A G T C A C G T A C G T A C G T

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTTATACTGGTC
----TGCTGGT-
 G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T

ttk/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTTATACTGGTC
TTNGATTATCCTTG--
 A C G T A C G T A C G T A C G T G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
C G A T G A C T A C G T A C T G T C G A A C G T C G A T C T G A A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T

ttk/MA0460.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTATACTGGTC
ATTATCCTT---
 G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
T C G A A C G T C G A T C T G A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

YML081W(MacIsaac)/Yeast

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTATACTGGTC
TTCAGACTGG--
 G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T A C G T G T A C C G T A C A T G C G T A A G T C A C G T A C T G A T C G A C G T A C G T

gcm2/MA0917.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTATACTGGTC
---ATGCGGGT-
 G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T A C G T A C G T T C G A A G C T T C A G T A G C C A T G A C T G A C T G A G C T A C G T

KUA1/MA1398.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTATACTGGTC
ATCTTATCCAA---
 A C G T A C G T G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
C G T A G A C T A T G C G C A T C G A T G T C A G A C T T A G C G A T C C G T A G C A T A C G T A C G T A C G T

SWI5/MA0402.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTTATACTGGTC
----TGCTGGTT
 G A T C A C G T A G C T G T C A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T G A C T