Information for 10-GGACAAATACAG (Motif 10)

C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
Reverse Opposite:
A G T C A C G T C T A G A C G T C T G A A G C T C A G T A C G T C T A G C G A T A T G C A G T C
p-value:1e-578
log p-value:-1.331e+03
Information Content per bp:1.949
Number of Target Sequences with motif224.0
Percentage of Target Sequences with motif47.46%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets157.4 +/- 31.1bp
Average Position of motif in Background111.4 +/- 69.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAATACAG
GGAACAAAGR---
 A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGACAAATACAG
NNNTAACAATTATAN
 A C G T A C G T A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGACAAATACAG
ATTTACGACAAATAGC-
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T

SOX4/MA0867.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGACAAATACAG
GAACAAAGGG--
 C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGACAAATACAG
AAAACAAAGAA--
 A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGACAAATACAG
BMRVACAAWGGV--
 A C G T A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAATACAG
RNAACAATGG---
 A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAATACAG
AAAACAAAGG---
 A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAATACAG
VRRACAAWGG---
 A C G T C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGACAAATACAG-
-GCTAAAAATAGC
 C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C