Information for 4-GCCAATCGGG (Motif 12)

C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
Reverse Opposite:
A G T C G A T C A G T C C T A G C T G A G A C T A C G T C T A G T A C G A G T C
p-value:1e-536
log p-value:-1.235e+03
Information Content per bp:1.891
Number of Target Sequences with motif268.0
Percentage of Target Sequences with motif56.78%
Number of Background Sequences with motif132.3
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets127.2 +/- 45.5bp
Average Position of motif in Background113.4 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GCCAATCGGG
AGCCAATCGG-
 A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

NFYB/MA0502.2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATCGGG
NTGGCCAATGAG-
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCAATCGGG
AACCAATCAGA
 A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCCAATCGGG
ACTAGCCAATCA--
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCCAATCGGG
AGCCAATCAGA
 A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCAATCGGG
CGTGCCAAG----
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCAATCGGG---
ACTCCTAATTAGTCGT
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G A C G T A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCCAATCGGG---
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAATCGGG
GGTGCCAAGT---
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCAATCGGG-
CGCCATATGTCC
 A C G T C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G A C G T
A T G C T C A G A T G C A T G C C T G A G C A T C G T A A G C T A T C G A C G T A G T C T A G C