Information for 21-AACCGGACAC (Motif 24)

C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
Reverse Opposite:
T A C G A C G T A C T G A C G T A G T C G A T C T C A G A C T G A C G T A C G T
p-value:1e-145
log p-value:-3.341e+02
Information Content per bp:1.898
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif18.43%
Number of Background Sequences with motif73.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets124.1 +/- 49.5bp
Average Position of motif in Background104.0 +/- 79.1bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AACCGGACAC--
TGWAAYCTGABACCB
 A C G T A C G T A C G T C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

ETV2/MA0762.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AACCGGACAC-
AACCGGAAATA
 C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C A C G T
C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

SIX1/MA1118.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AACCGGACAC
GTAACCTGATA-
 A C G T A C G T C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AACCGGACAC----
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AACCGGACAC
GWAAYHTGAKMC
 A C G T A C G T C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AACCGGACAC
-TCTAGACA-
 C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AACCGGACAC
GWAAYHTGABMC
 A C G T A C G T C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

SIX2/MA1119.1/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AACCGGACAC
AACTGAAACCTGATAC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AACCGGACAC
-ARNTGACA-
 C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACCGGACAC
--CCAGACAG
 C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G