Information for 21-TGCCMKGGCAWR (Motif 25)

A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G
Reverse Opposite:
A G T C C G T A A C G T A C T G A G T C A G T C G T C A C A G T C T A G T C A G A G T C C T G A
p-value:1e-107
log p-value:-2.474e+02
Information Content per bp:1.766
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif9.53%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.2 +/- 49.9bp
Average Position of motif in Background127.4 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TGCCMKGGCAWR-
ATGCCCGGGCATGT
 A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGCCMKGGCAWR
NGTTGCCATGGCAA-
 A C G T A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGCCMKGGCAWR
GGTTGCCATGGCAA-
 A C G T A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

TP53/MA0106.3/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGCCMKGGCAWR--
GACATGCCCGGGCATGTT
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

RFX3/MA0798.2/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGCCMKGGCAWR
CGGTTGCTATGGCA--
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCCMKGGCAWR--
GTTGCCATGGCAACCG
 A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G A C G T A C G T
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGCCMKGGCAWR
KGTTGCCATGGCAAC
 A C G T A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCCMKGGCAWR
WDNCTGGGCA--
 A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGCCMKGGCAWR
--NGTGGGCAT-
 A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGCCMKGGCAWR----
AACATGCCCAGACATGCCCN
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C