Information for 22-GTGTRCTC (Motif 28)

A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A A C T G G A C T C T G A A G T C C G T A A G T C
p-value:1e-50
log p-value:-1.160e+02
Information Content per bp:1.863
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif331.5
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets148.3 +/- 44.2bp
Average Position of motif in Background106.1 +/- 72.7bp
Strand Bias (log2 ratio + to - strand density)5.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTGTRCTC--
CTGTTCCTGG
 A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF274/MA1592.1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GTGTRCTC---
GGTATGAGTTCTCGCT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T A C G T A C G T
C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTGTRCTC--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GTGTRCTC--
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTGTRCTC------
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGTRCTC
GTGACCTT
 A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

VDR/MA0693.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGTRCTC-
-TGAACTCA
 A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T
A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGTRCTC-----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGTRCTC--
GTACACTCAC
 A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T A C G T
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGTRCTC-
-TGACCTYA
 A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A