Information for 23-TAATTAGG (Motif 29)

A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
Reverse Opposite:
A G T C A G T C A C G T C G T A C G T A C G A T A C G T C G T A
p-value:1e-47
log p-value:-1.099e+02
Information Content per bp:1.900
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif15.89%
Number of Background Sequences with motif726.1
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets66.2 +/- 38.0bp
Average Position of motif in Background99.4 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VSX2/MA0726.1/Jaspar

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGG
NTAATTAG-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TAATTAGG
TAATTAGN
 A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C

PRRX2/MA0075.3/Jaspar

Match Rank:3
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGG
NTAATTAG-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
G A C T A G C T C G T A C G T A A C G T A C G T T C G A T C A G A C G T

LHX9/MA0701.2/Jaspar

Match Rank:4
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGG
NTAATTAG-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
A G C T A G C T G T C A C G T A A C G T C A G T C T G A T C A G A C G T

VSX1/MA0725.1/Jaspar

Match Rank:5
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGG
NTAATTAG-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T

HOXD3/MA0912.2/Jaspar

Match Rank:6
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGG
GTAATTAG-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G A C G T

mix-a/MA0621.1/Jaspar

Match Rank:7
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---TAATTAGG
AATTAATTAGT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

EMX2/MA0886.1/Jaspar

Match Rank:8
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TAATTAGG
GCTAATTAGC
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
T C A G A T G C G A C T G T C A C G T A A C G T A C G T C G T A T C A G A T G C

EMX1/MA0612.2/Jaspar

Match Rank:9
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-TAATTAGG
CTAATTAG-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
A T G C G A C T G T C A C G T A A C G T A C G T C G T A T A C G A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-TAATTAGG
TTAATTAG-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T