Information for 3-CTTATACTGGTC (Motif 3)

G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
Reverse Opposite:
T C A G C T G A A G T C A G T C C G T A T C A G A G C T C T G A C A G T C T G A G T C A C T A G
p-value:1e-745
log p-value:-1.718e+03
Information Content per bp:1.942
Number of Target Sequences with motif225.0
Percentage of Target Sequences with motif47.67%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.1 +/- 35.7bp
Average Position of motif in Background127.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTTATACTGGTC
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTTATACTGGTC-
NNAATTTTATTGGNTN
 A C G T A C G T A C G T G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTTATACTGGTC
NNATTTTATTGGNN
 A C G T A C G T G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTTATACTGGTC---
---CYWSTGGTCARA
 G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTTATACTGGTC-
--CATGCGGGTAC
 G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C A C G T
A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTTATACTGGTC
-TTTTATKRGG-
 G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTTATACTGGTC
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTTATACTGGTC---
NNNNATGCGGGTNNNN
 A C G T G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTATACTGGTC-----
NNANTGGTGGTCTTNNN
 G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

HOXA13/MA0650.2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTATACTGGTC
GTTTTATTGGN-
 G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T