Information for 5-TCCTTTGTTCGG (Motif 5)

A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
Reverse Opposite:
T A G C T G A C C T A G C G T A C G T A A G T C C T G A T C G A G T C A C T A G A C T G C G T A
p-value:1e-703
log p-value:-1.620e+03
Information Content per bp:1.924
Number of Target Sequences with motif275.0
Percentage of Target Sequences with motif58.26%
Number of Background Sequences with motif38.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets114.0 +/- 29.4bp
Average Position of motif in Background86.1 +/- 94.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTTGTTCGG--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TCCTTTGTTCGG
-YCTTTGTTCC-
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTTGTTCGG--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

SOX4/MA0867.2/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TCCTTTGTTCGG
NCCTTTGTTC--
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TCCTTTGTTCGG
NCCATTGTTC--
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TCCTTTGTTCGG
-CCTTTGTTTT-
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

SOX12/MA1561.1/Jaspar

Match Rank:7
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TCCTTTGTTCGG-
--NATTGTTCGGT
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G A C G T
A C G T A C G T A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCCTTTGTTCGG
NNCTTTGTTNN-
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:9
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TCCTTTGTTCGG
BCCWTTGTBYKV
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TCCTTTGTTCGG
-CCWTTGTYYB-
 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T