Information for 9-CGATTKGCTAGC (Motif 9)

G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
Reverse Opposite:
T C A G T G A C G C A T C G T A C A T G A G T C G T A C C T G A G T C A G C A T G A T C C T A G
p-value:1e-587
log p-value:-1.352e+03
Information Content per bp:1.646
Number of Target Sequences with motif243.0
Percentage of Target Sequences with motif51.48%
Number of Background Sequences with motif44.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets145.6 +/- 25.9bp
Average Position of motif in Background102.3 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGATTKGCTAGC
TGATTGGCTANN
 G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGATTKGCTAGC
CCGATTGGCT---
 A C G T G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGATTKGCTAGC------
--ACTTGCTACCTACACC
 G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGATTKGCTAGC----
NNNTTAGGTAGCNTNT
 G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGATTKGCTAGC
CTCATTGGCCAG-
 A C G T G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T

NFYA/MA0060.3/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGATTKGCTAGC
NCTGATTGGNN---
 A C G T A C G T G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGATTKGCTAGC
NCTGATTGGNN---
 A C G T A C G T G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGATTKGCTAGC
----TGTCTAGA
 G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGATTKGCTAGC-----
AAATTTGCTGACTTAGA
 G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGATTKGCTAGC
---TWGTCTGV-
 G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T