Information for 20-TTATTTGAAG (Motif 20)

A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A G T C C T G A C G T A C G T A A C G T C G T A C G T A
p-value:1e-334
log p-value:-7.714e+02
Information Content per bp:1.965
Number of Target Sequences with motif187.0
Percentage of Target Sequences with motif34.44%
Number of Background Sequences with motif110.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets63.9 +/- 32.1bp
Average Position of motif in Background107.6 +/- 75.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTATTTGAAG-
--ATTTGAATT
 A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTATTTGAAG
CTATTTTTGG
 A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTATTTGAAG---
---TTTGAAACCG
 A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTGAAG-
KCTATTTTTRGH
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2A/MA0052.4/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTATTTGAAG--
NNTCTATTTTTAGNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTATTTGAAG--
TTTTTTTTCNNGTN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTATTTGAAG-
TCTATTTATAGN
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTATTTGAAG-
GCTATTTTTGGM
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTATTTGAAG---
TTCTATTTTTAGNNN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTATTTGAAG-
GCTATTTTTAGC
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T A C T G C T G A C G T A A C T G A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C