Information for 19-CCAATCGG (Motif 22)

A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G C G T A A C G T A C G T A C T G A C T G
p-value:1e-302
log p-value:-6.954e+02
Information Content per bp:1.530
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif21.73%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets114.6 +/- 48.2bp
Average Position of motif in Background79.2 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)5.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--CCAATCGG
AGCCAATCGG
 A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYA/MA0060.3/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCAATCGG-
AACCAATCAGA
 A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYC/MA1644.1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCAATCGG-
AGCCAATCAGA
 A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CCAATCGG
ACTAGCCAATCA-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCGG
NTGGCCAATGAG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCAATCGG
CCAATCAA
 A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCAATCGG-
CTAATCGNT
 A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G A C G T
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PH0089.1_Isx/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCAATCGG----
ACTCCTAATTAGTCGT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CCAATCGG----
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAATCGG
GAACAATGG-
 A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C T G A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T