Information for 20-CGTCAGGTTATA (Motif 23)

A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
Reverse Opposite:
A C G T C G T A A G C T C G T A C G T A A G T C A G T C A C G T A C T G C G T A G A T C C T A G
p-value:1e-183
log p-value:-4.230e+02
Information Content per bp:1.938
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif13.08%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets127.7 +/- 49.9bp
Average Position of motif in Background141.5 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGTCAGGTTATA
TATCAGGTTAC-
 A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGGTTATA-
NNATCAGGTGATNN
 A C G T A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A A C G T
C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

SIX2/MA1119.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGGTTATA---
GTATCAGGTTTCAGNN
 A C G T A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTCAGGTTATA
-GTCACGTGAT-
 A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGTCAGGTTATA
AAAACAGGTTTT-
 A C G T A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTCAGGTTATA
-ATCACGTGAT-
 A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
A C G T C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGTCAGGTTATA
VGGTVTCAGRTTWCA
 A C G T A C G T A C G T A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
T A G C T C A G T C A G C A G T T C A G A C G T A G T C T C G A C T A G C T A G A C G T A C G T C G A T G T A C G T C A

RUNX3/MA0684.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGGTTATA
NNTTGAGGTTNN-
 A C G T A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGTCAGGTTATA
GKVTCADRTTWC-
 A C G T A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

SCRT2/MA0744.2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGTCAGGTTATA
AAAGCAACAGGTGGTT
 A C G T A C G T A C G T A C G T A G T C C T A G A C G T A G T C C G T A A C T G T A C G A C G T A C G T C T G A C G A T C G T A
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T