Information for 24-AGCAGTAGGG (Motif 25)

C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G
Reverse Opposite:
A G T C A G T C A T G C A C G T C G T A A G T C A C G T A C T G A G T C A C G T
p-value:1e-140
log p-value:-3.240e+02
Information Content per bp:1.985
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif11.60%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets131.3 +/- 45.3bp
Average Position of motif in Background113.8 +/- 76.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGCAGTAGGG-
-ATAGTAGGTG
 C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G A C G T
A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCAGTAGGG-
CACAGCAGGGG
 C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCAGTAGGG--
GCACAYAGTAGGKCY
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCAGTAGGG
NACAGTAGCN
 C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

MYB/MA0100.3/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCAGTAGGG
NNCAGTTGNN
 C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCAGTAGGG--
CACAGCAGGGGG
 C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGTAGGG--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Zic2/MA1629.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCAGTAGGG--
CTCACAGCAGGGGG
 A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G A C G T A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTAGGG
DCTCAGCAGG-
 A C G T C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCAGTAGGG--
CCACACAGCAGGAGA
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T C G T A A T C G A C T G A C T G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A