Information for 1-AGTTGCTAGC (Motif 7)

C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T G T C A A C T G A G T C C G T A C G T A A G T C A C G T
p-value:1e-874
log p-value:-2.013e+03
Information Content per bp:1.988
Number of Target Sequences with motif249.0
Percentage of Target Sequences with motif45.86%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets145.0 +/- 25.6bp
Average Position of motif in Background93.1 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGTTGCTAGC-
CTGTTGCTAGGS
 A C G T C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGCTAGC---
NCCGTTGCTANGNGN
 A C G T A C G T C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AGTTGCTAGC-------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGCTAGC---
NNCGTTGCTATGGNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

RFX7/MA1554.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGTTGCTAGC
CGTTGCTAT-
 C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C
A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTTGCTAGC---
CTGTTGCTATGGCA
 A C G T C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTTGCTAGC-----
KGTTGCTAGGMAACA
 C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

MYB/MA0100.3/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGTTGCTAGC
NNCAGTTGNN---
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGTTGCTAGC-
---TGCCAGCB
 C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T
A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

RFX3/MA0798.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTTGCTAGC---
CGGTTGCTATGGCA
 A C G T C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A