Information for 1-AATGTGAGGTCC (Motif 1)

C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C
Reverse Opposite:
C T A G C T A G C T G A A G T C G A T C A C G T A G T C T G C A G A T C C T G A C G A T A C G T
p-value:1e-1157
log p-value:-2.665e+03
Information Content per bp:1.950
Number of Target Sequences with motif326.0
Percentage of Target Sequences with motif60.04%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets157.5 +/- 44.1bp
Average Position of motif in Background127.9 +/- 48.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATGTGAGGTCC
CGTGGGTGGTCC
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

RUNX3/MA0684.2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATGTGAGGTCC-
-NNTTGAGGTTNN
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C A C G T
A C G T C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

CREB1/MA0018.4/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATGTGAGGTCC--
-TTATGATGTCATA
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C A C G T A C G T
A C G T G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATGTGAGGTCC
YSTGGGTGGTCT
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

ATF2/MA1632.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AATGTGAGGTCC--
-AAATGAGGTCATT
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C A C G T A C G T
A C G T C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T

CREM/MA0609.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATGTGAGGTCC----
GCAGTGACGTCACTGC
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C A C G T A C G T A C G T A C G T
T A C G T G A C C T G A T C A G G A C T A T C G C T G A A G T C T C A G G A C T T A G C C T G A A G T C G A C T A C T G A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AATGTGAGGTCC
----TRAGGTCA
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

TEAD2/MA1121.1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AATGTGAGGTCC
GNNTGGAATGTGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T A C G T A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AATGTGAGGTCC
--HAWGRGGCCM
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C
A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

JUN::JUNB(var.2)/MA1133.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AATGTGAGGTCC--
--TGTGACGTCATT
 C G T A G C T A A G C T C T A G A C G T T C A G C G T A C T A G C T A G G A C T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C A G G C A T C A T G C G T A A G T C C T A G C A G T G T A C C T G A A C G T A C G T