Information for 10-CCAATCGGGACA (Motif 11)

A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
Reverse Opposite:
C G A T A C T G C G A T A G T C A G T C A G T C C T A G C T G A G A C T A G C T A C T G C T A G
p-value:1e-890
log p-value:-2.051e+03
Information Content per bp:1.925
Number of Target Sequences with motif261.0
Percentage of Target Sequences with motif48.07%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets152.7 +/- 27.7bp
Average Position of motif in Background73.9 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCAATCGGGACA
AGCCAATCGG----
 A C G T A C G T A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCAATCGGGACA
AACCAATCAGA---
 A C G T A C G T A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCAATCGGGACA
AGCCAATCAGA---
 A C G T A C G T A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCAATCGGGACA
ACTAGCCAATCA-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCAATCGGGACA--
-CTATCGCGACATA
 A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A A C G T A C G T
A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

RORB/MA1150.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCAATCGGGACA-
--AATTAGGTCAC
 A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A A C G T
A C G T A C G T C G T A G C T A C G A T A C G T C T G A A C T G C T A G A G C T G A T C C T G A G A T C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAATCGGGACA-
-WAABTAGGTCAV
 A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A A C G T
A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

NFYB/MA0502.2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCGGGACA
NTGGCCAATGAG----
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCAATCGGGACA
CCAATCAA----
 A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCGGGACA
ACNNCTAATTAGNNNN
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A C T G A A G C T G A T C T C A G C T A G C T A G G C T A A G T C C G T A
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T