Information for 14-TTATACTGGTCC (Motif 13)

A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
Reverse Opposite:
A C T G T C A G C T G A A G T C A G T C C G T A T C A G A G C T C T G A A C G T C G T A T C G A
p-value:1e-841
log p-value:-1.937e+03
Information Content per bp:1.943
Number of Target Sequences with motif276.0
Percentage of Target Sequences with motif50.83%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets26.2 +/- 36.6bp
Average Position of motif in Background80.5 +/- 104.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTATACTGGTCC
TATAATTATAATATTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTATACTGGTCC
-CATGCGGGTAC
 A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTATACTGGTCC-
---TKCTGTTCCA
 A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

HOXB13/MA0901.2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTATACTGGTCC
NNATTTTATTGGNN-
 A C G T A C G T A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTATACTGGTCC
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTATACTGGTCC--
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTATACTGGTCC
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.55
Offset:-9
Orientation:reverse strand
Alignment:---------TTATACTGGTCC
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.55
Offset:-9
Orientation:reverse strand
Alignment:---------TTATACTGGTCC
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTATACTGGTCC
GTTTTATTGGN--
 A C G T A C G T A C G T G T C A G A C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C G T A C
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T A C G T