Information for 5-GTCCAAGCAA (Motif 15)

A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C G T A C G T A T C G A C T G C G T A A G T C
p-value:1e-688
log p-value:-1.584e+03
Information Content per bp:1.985
Number of Target Sequences with motif236.0
Percentage of Target Sequences with motif43.46%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets30.1 +/- 32.1bp
Average Position of motif in Background70.0 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a/MA1624.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTCCAAGCAA-
TTTCCAAGAAAT
 A C G T A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A A C G T
C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTCCAAGCAA
--CCAATCAA
 A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

NFYC/MA1644.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCCAAGCAA-
AGCCAATCAGA
 A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCCAAGCAA-
AACCAATCAGA
 A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCCAAGCAA--
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAAGCAA
TTTCCCAGAAN
 A C G T A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCCAAGCAA-----
CGACCCAATCAACGGTG
 A C G T A C G T A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GTCCAAGCAA
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCCAAGCAA---
-SCCTAGCAACAG
 A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCCAAGCAA
ACTAGCCAATCA-
 A C G T A C G T A C G T A C T G A C G T A G T C A T G C C G T A G T C A A C T G A G T C C G T A C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T