Information for 18-GTTCCAGCCAAT (Motif 16)

T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T
Reverse Opposite:
C G T A G A C T A C G T T C A G C T A G A G T C C A G T C T A G C A T G C G T A C T G A A G T C
p-value:1e-677
log p-value:-1.561e+03
Information Content per bp:1.654
Number of Target Sequences with motif200.0
Percentage of Target Sequences with motif36.83%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets163.3 +/- 48.0bp
Average Position of motif in Background41.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GTTCCAGCCAAT--
--ACTAGCCAATCA
 T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T A C G T A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

E2F8/MA0865.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTTCCAGCCAAT
TTTCCCGCCAAA
 T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GTTCCAGCCAAT
---BCAGACWA-
 T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTTCCAGCCAAT-
TTTTCCCGCCAAAA
 A C G T T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GTTCCAGCCAAT---
-----AGCCAATCGG
 T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

ZBTB12/MA1649.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTCCAGCCAAT
NNGTTCCAGNN---
 A C G T A C G T T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTTCCAGCCAAT
-TTCCCGCCWG-
 T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTTCCAGCCAAT-
ACTATGCCAACCTACC
 A C G T A C G T A C G T T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTTCCAGCCAAT
---CGTGCCAAG
 T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTCCAGCCAAT
TTTCCCGCCMAV
 T C A G A G C T G C A T G T A C A G T C G C T A T C A G A G T C A G T C T G C A C T G A G C A T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C