Information for 21-CGTYAGGTTATA (Motif 23)

G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
Reverse Opposite:
G C A T C G T A C A G T C T G A G T C A G T A C A G T C C A G T C T A G C G T A A G T C C T A G
p-value:1e-231
log p-value:-5.340e+02
Information Content per bp:1.553
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif15.10%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets122.3 +/- 53.7bp
Average Position of motif in Background121.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGTYAGGTTATA
--TRAGGTCA--
 G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

SIX1/MA1118.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGTYAGGTTATA
TATCAGGTTAC-
 G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGTYAGGTTATA
-CAAAGGTCAAA
 G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTYAGGTTATA-
NNATCAGGTGATNN
 A C G T G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A A C G T
C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

SIX2/MA1119.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTYAGGTTATA---
GTATCAGGTTTCAGNN
 A C G T G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGTYAGGTTATA
----AGGTCA--
 G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGTYAGGTTATA
---GAGGTCAT-
 G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTYAGGTTATA
GKBCARAGGTCA--
 A C G T A C G T G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGTYAGGTTATA
---AAGGTCAC-
 G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTYAGGTTATA
NNTTGAGGTTNN-
 A C G T G A T C T C A G G C A T G A T C G C T A T C A G C A T G C A G T G A C T G T C A G C A T C G T A
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T