Information for 23-CAGTAGGGTRGA (Motif 26)

A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
Reverse Opposite:
A C G T A G T C A G C T C T G A G A T C A G T C A G T C A G C T C T G A A T G C A C G T A C T G
p-value:1e-167
log p-value:-3.857e+02
Information Content per bp:1.932
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif15.65%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets138.5 +/- 43.6bp
Average Position of motif in Background117.1 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGTAGGGTRGA
ATAGTAGGTG---
 A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGTAGGGTRGA
CACAGCAGGGG---
 A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGGGTRGA
GCACAYAGTAGGKCY--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGTAGGGTRGA
CACAGCAGGGGG--
 A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGTAGGGTRGA
CTCACAGCAGGGGG--
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G A C G T A C G T

OSR1/MA1542.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGTAGGGTRGA
NACAGTAGCN----
 A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGTAGGGTRGA
CHCAGCRGGRGG--
 A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGTAGGGTRGA
--GGAGGGGGAA
 A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAGGGTRGA
DCTCAGCAGG-----
 A C G T A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGTAGGGTRGA
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G A C T C T G A C T A G G T C A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T