Information for 5-AAGCAAGCATTA (Motif 6)

C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A
Reverse Opposite:
A G C T G T C A C G T A A G C T T C A G A G T C A C G T A C G T A C T G A G T C A C G T G A C T
p-value:1e-960
log p-value:-2.213e+03
Information Content per bp:1.974
Number of Target Sequences with motif242.0
Percentage of Target Sequences with motif44.57%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 37.6bp
Average Position of motif in Background121.2 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAGCAAGCATTA-
---AAACMATTAN
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A A C G T
A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGCAAGCATTA
AAACAAACATTC
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAGCAAGCATTA
---CAAGCTT--
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGCATTA
AAGGCAAGTGT--
 A C G T C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGCAAGCATTA
GTCAACCAAGAATTC
 A C G T A C G T A C G T C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

BARX2/MA1471.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCAAGCATTA-
-AAAAACCATTAC
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A A C G T
A C G T C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGCAAGCATTA---
AAGTCAGCANTTTTN
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

FOXA1/MA0148.4/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGCAAGCATTA
ATGTAAACATGT
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGCAAGCATTA--
----NNGGATTAGN
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGCAAGCATTA--
----VRGGATTARN
 C G T A T C G A C T A G A G T C C G T A C G T A A C T G A G T C T C G A A C G T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C