Information for 9-CAAGRAGNAGWG (Motif 11)

A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
Reverse Opposite:
A G T C C G T A A G T C A G C T A T G C A G T C A C G T A G C T A G T C A G C T C A G T A T C G
p-value:1e-63
log p-value:-1.452e+02
Information Content per bp:1.638
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif87.36%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets182.2 +/- 80.0bp
Average Position of motif in Background223.5 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.86
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAGRAGNAGWG
GAAGAAG-----
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

NAC078/MA1677.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAGRAGNAGWG
AACAAGAAACAT--
 A C G T A C G T A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
G C T A C T G A A G T C C G T A G T C A A C T G G C T A G C T A C G T A G A T C G T C A C G A T A C G T A C G T

RBM5(RRM)/Homo_sapiens-RNCMPT00154-PBM/HughesRNA

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGRAGNAGWG
GAAGGAG-----
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A T C G C G T A T C G A A T C G A T C G C T G A C T A G A C G T A C G T A C G T A C G T A C G T

CUP2/MA0287.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAGRAGNAGWG
-CAGCAAAAATG
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A C G T A G T C C G T A A C T G G T A C C T G A T C A G C G T A C G T A C T G A C G A T C T A G

Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAAGRAGNAGWG
--AGAAGGAC--
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A C G T A C G T C T G A A C T G C G T A C G T A A C T G A C T G C T G A T G A C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAAGRAGNAGWG
--GGGAGGACNG
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SF2(RRM)/Drosophila_melanogaster-RNCMPT00066-PBM/HughesRNA

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAAGRAGNAGWG
--NGGAGGA---
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A C G T A C G T C T G A A C T G C T A G G C T A A C T G A C T G C T G A A C G T A C G T A C G T

SRSF9(RRM)/Homo_sapiens-RNCMPT00074-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAAGRAGNAGWG
--AGGAGCA---
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A C G T A C G T C G T A C A T G C T A G C G T A T A C G G T A C C T G A A C G T A C G T A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAAGRAGNAGWG
--AGAAGGC---
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A C G T A C G T C G T A A C T G C G T A C G T A C T A G T C A G G T A C A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAAGRAGNAGWG
---GGAGGAN--
 A T G C G T C A T C G A T C A G C T G A T G C A C T A G T A C G C T G A T C A G G C A T C T A G
A C G T A C G T A C G T A C T G C T A G C G T A A C T G A C T G C T G A T G C A A C G T A C G T