Information for 10-CCCAATAAATAT (Motif 12)

A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
Reverse Opposite:
C T G A A C G T C G T A A C G T A C G T A C G T C G T A A G C T A C G T C T A G A C T G A C T G
p-value:1e-62
log p-value:-1.438e+02
Information Content per bp:1.929
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif82.76%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets270.3 +/- 37.4bp
Average Position of motif in Background133.3 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bin/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.77
Offset:4
Orientation:forward strand
Alignment:CCCAATAAATAT
----ATAAATA-
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A C G T C G T A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CCCAATAAATAT
CCYMATAAAA--
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

cad/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CCCAATAAATAT
-NTAATAAAAN-
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
A C G T A T G C G A C T G T C A C G T A A C G T G C T A C G T A C G T A C G T A C T G A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCCAATAAATAT--
AACCCAATAAAATTCG
 A C G T A C G T A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

cad/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CCCAATAAATAT
-NTAATAAA---
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
A C G T A T G C A G C T G T C A G T C A G A C T C G T A G C T A C T G A A C G T A C G T A C G T

EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCCAATAAATAT
CCCATTAAAT--
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
T A G C G A T C G T A C T G C A G C A T G C A T G T C A G T C A G C T A G A C T A C G T A C G T

zen/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CCCAATAAATAT
---AATAAA---
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
A C G T A C G T A C G T G T C A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:8
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CCCAATAAATAT
--HAATAAAGNN
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
A C G T A C G T G A T C G C T A C G T A C G A T C G T A G T C A C T G A A T C G C G A T A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCCAATAAATAT
CCCAATAAAAC-
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCCAATAAATAT
NCYAATAAAA--
 A G T C A G T C A G T C C G T A C T G A A C G T C G T A C G T A C G T A A C G T C G T A A G C T
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T