Information for 11-CCTTTGCTCA (Motif 17)

A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A
Reverse Opposite:
A C G T A T C G C G T A C T A G A G T C C G T A C G T A C T G A A C T G A C T G
p-value:1e-55
log p-value:-1.279e+02
Information Content per bp:1.912
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif82.76%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets321.1 +/- 45.6bp
Average Position of motif in Background224.6 +/- 83.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAC1/MA0326.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CCTTTGCTCA
--TTTGCTCA
 A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A
A C G T A C G T C G A T C A G T A C G T C T A G A G T C A C G T A G T C C T G A

MAC1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CCTTTGCTCA
--TTTGCTC-
 A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCTTTGCTCA---
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCTTTGCTCA
YCTTTGTTCC
 A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCTTTGCTCA
NCCATTGTTC-
 A C G T A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCTTTGCTCA---
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGCTCA---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX4/MA0867.2/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTGCTCA
NCCTTTGTTC-
 A C G T A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGCTCA---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

pan/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCTTTGCTCA-
CCTTTGATCTT
 A G T C A G T C A G C T A C G T A C G T A C T G A G T C A C G T A T G C G T C A A C G T
A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T