Information for 20-TGTTGGAGGCCA (Motif 21)

A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
Reverse Opposite:
A G C T C T A G A C T G A G T C A G T C A C G T A T G C A G T C C G T A G T C A A G T C C G T A
p-value:1e-52
log p-value:-1.216e+02
Information Content per bp:1.893
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif72.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background53.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGGAGGCCA
NTTCTGTTGCNN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G A C G T A C G T A C G T A C G T

RAV1/MA0582.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGGAGGCCA
NTTCTGTTGCNN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G A C G T A C G T A C G T A C G T

GCR1/MA0304.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGTTGGAGGCCA
---TGGAAGCC-
 A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
A C G T A C G T A C G T C G A T A T C G A T C G C G T A G C T A A C T G G T A C A G T C A C G T

Aef1/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGGAGGCCA
TTGTTG-------
 A C G T A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTTGGAGGCCA
-GATGGAGT---
 A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTTGGAGGCCA
TGATGGAW----
 A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T

SKN7/MA0381.1/Jaspar

Match Rank:7
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TGTTGGAGGCCA-
-------GGCCAT
 A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A T G C T C G A C A G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGGAGGCCA
VTGYGKGGGAGK---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G A C G T A C G T A C G T

RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TGTTGGAGGCCA
TWWTTTCTGTTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
C A G T C G T A C G T A G C A T G A C T G C A T G T A C A G C T A C T G G A C T A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf281/MA1630.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTTGGAGGCCA
GGTGGGGGAGG---
 A C G T A C G T A C G T A C T G A C G T A C G T C T A G T A C G C G T A A C T G A C T G A G T C A G T C C T G A
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G A C G T A C G T A C G T