Information for 22-TCTTYKTC (Motif 29)

A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A G T C A C T A G C G T A C G T A A C T G C G T A
p-value:1e-31
log p-value:-7.274e+01
Information Content per bp:1.904
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif60.92%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif3.60%
Average Position of motif in Targets346.7 +/- 42.2bp
Average Position of motif in Background182.1 +/- 85.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TCTTYKTC
-CTTCTTC
 A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C
A C G T T A G C A C G T A C G T A T G C A G C T A C G T A G T C

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TCTTYKTC
NTCTTCT--
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C
T C A G A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TCTTYKTC
CKTCKTCTTY
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C
A T G C C A G T A C G T A G T C C A T G A C G T A G T C A C G T A G C T G A T C

PRDM1/MA0508.3/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCTTYKTC--
TTCTTTCTCTT
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

AZF1/MA0277.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCTTYKTC
TTTCTTTTT-
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TCTTYKTC
WHWHHACTTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C
C G A T G C T A G C T A G C A T G C T A C G T A A G T C A C G T A C G T A C G T C G A T A G C T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCTTYKTC--
NNCTTTGTTNN
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

eor-1/MA0543.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCTTYKTC-----
TCTCTGCGTCTCTNN
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A T G C G A C T A G T C A C G T A T C G G A T C A T C G G A C T G A T C C G A T G A T C A G C T G A T C G A C T

At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCTTYKTC
TWACTTTTTS
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C
G A C T G C T A T G C A A G T C A C G T A C G T A C G T C G A T A C G T T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCTTYKTC-----
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T