Information for 24-AAGAAACT (Motif 31)

C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A C T A G A C G T A C G T A C G T A G T C A C G T A C G T
p-value:1e-26
log p-value:-6.080e+01
Information Content per bp:1.953
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif50.57%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets250.1 +/- 64.9bp
Average Position of motif in Background188.3 +/- 81.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NAC078/MA1677.1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AAGAAACT-
AACAAGAAACAT
 A C G T A C G T A C G T C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T A C G T
G C T A C T G A A G T C C G T A G T C A A C T G G C T A G C T A C G T A G A T C G T C A C G A T

PABPC5(RRM)/Homo_sapiens-RNCMPT00171-PBM/HughesRNA

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:AAGAAACT
-AGAAAAT
 C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T
A C G T C G T A C T A G C G T A C G T A C G T A C G T A G A C T

PTBP1(RRM)/Homo_sapiens-RNCMPT00269-PBM/HughesRNA

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAGAAACT
-AGAAAGT
 C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T
A C G T C T G A C T A G C G T A C G T A C G T A C T A G C A G T

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAGAAACT
GAAGAAG--
 A C G T C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T
T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T A C G T

Tb_0220(RRM)/Trypanosoma_brucei-RNCMPT00220-PBM/HughesRNA

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGAAACT
NAGAAAG-
 C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T
C G T A C T G A A C T G C T G A C G T A C T G A C T A G A C G T

NAC029/MA1675.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAGAAACT--
TACACGCAACTTA
 A C G T A C G T A C G T C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T A C G T A C G T
G C A T C G T A A G T C G C T A T G A C C A T G A G T C G T C A C G T A A G T C G A C T C G A T G C T A

PRDM4/MA1647.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAGAAACT---
NAGAAACAGNN
 C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAGAAACT-
-AGAATCTT
 C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T A C G T
A C G T T C G A A C T G G T C A C G T A A C G T G T A C C G A T C A G T

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGAAACT-
HAATAAAGNN
 A C G T C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T A C G T
G A T C G C T A C G T A C G A T C G T A G T C A C T G A A T C G C G A T A C G T

ZC3H14(Znf)/Homo_sapiens-RNCMPT00086-PBM/HughesRNA

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGAAACT
AAACAAA--
 A C G T C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C G T
C G T A G T C A G T C A G T A C G T C A C G T A G T C A A C G T A C G T