Information for 4-KGAYRAACKCAG (Motif 7)

A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G
Reverse Opposite:
A T G C C G A T A T C G G T A C C T A G A G C T A G C T A G C T T C A G A G C T T G A C T G A C
p-value:1e-71
log p-value:-1.636e+02
Information Content per bp:1.577
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif89.66%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets156.2 +/- 148.0bp
Average Position of motif in Background209.9 +/- 70.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)2.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-KGAYRAACKCAG---
NNNNTGAATTCANNNC
 A C G T A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

CST6(MacIsaac)/Yeast

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:KGAYRAACKCAG
---NAAATGCA-
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G
A C G T A C G T A C G T C A T G T C G A C T G A C G T A A C G T C A T G T A G C T C G A A C G T

REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:KGAYRAACKCAG--
----AAACAGAGBA
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C T G A G T A C T C G A T C A G T C G A T C A G A C T G T G C A

IGF2BP2(KH,RRM)/Homo_sapiens-RNCMPT00033-PBM/HughesRNA

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:KGAYRAACKCAG
----ACAAACA-
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G
A C G T A C G T A C G T A C G T T G C A G T A C C G T A G C T A G C T A G T A C C G T A A C G T

IGF2BP3(KH,RRM)/Homo_sapiens-RNCMPT00172-PBM/HughesRNA

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:KGAYRAACKCAG
----ACANACA-
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G
A C G T A C G T A C G T A C G T G T C A G T A C G C T A G C T A G C T A G T A C G T C A A C G T

SIP4/SIP4_SM/9-SIP4(Harbison)/Yeast

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KGAYRAACKCAG
CGGNTGAATGGAA
 A C G T A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G
A G T C A C T G T C A G T G A C A G C T A C T G G T C A G C T A G C A T A T C G A C T G T C G A T C G A

KHDRBS3(KH)/Homo_sapiens-RNCMPT00034-PBM/HughesRNA

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KGAYRAACKCAG
-GATAAACN---
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G
A C G T C T A G C G T A A C G T C G T A C G T A C G T A T A G C T A C G A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:KGAYRAACKCAG
---TGAACTCA-
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G
A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

FHL1/MA0295.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:KGAYRAACKCAG-
-----GACGCAAA
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C A C T G A G T C C G T A T G C A C G T A

REF6/MA1415.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KGAYRAACKCAG--
---AAAACAGAGCA
 A C T G A C T G C T G A A G T C T C G A C T G A T C G A G A T C C A T G A T G C G C T A T A C G A C G T A C G T
A C G T A C G T A C G T C T G A C T G A G C T A T C G A A G T C T C G A A C T G C T G A C A T G A G T C G C T A