Information for 6-CYTGTGRTTA (Motif 9)

G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A
Reverse Opposite:
A C G T C G T A G C T A A G C T A T G C T C G A A G T C C G T A C T A G A C T G
p-value:1e-66
log p-value:-1.520e+02
Information Content per bp:1.789
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif91.95%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif2.93%
Average Position of motif in Targets195.5 +/- 65.7bp
Average Position of motif in Background122.4 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CYTGTGRTTA
GCTGTGGTTT
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CYTGTGRTTA-
-CTGTGGTTTN
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CYTGTGRTTA--
--NGTRATTAAK
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A A C G T A C G T
A C G T A C G T G T C A C T A G A G C T T C G A T G C A C A G T A G C T C G T A C T G A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CYTGTGRTTA
NNTGTGGTTT
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CYTGTGRTTA
GTCTGTGGTTT
 A C G T G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CYTGTGRTTA-
NNHTGTGGTTWN
 A C G T G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

lbe/MA0231.1/Jaspar

Match Rank:7
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CYTGTGRTTA
----TAGTTA
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A
A C G T A C G T A C G T A C G T A G C T C T G A T C A G A C G T A C G T C G T A

ZHD5/MA1326.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CYTGTGRTTA--
-ACGTAATTAAT
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A A C G T A C G T
A C G T C T G A G A T C C T A G A G C T T C G A T C G A A C G T A C G T C G T A T C G A A G C T

HOXA4/MA1496.1/Jaspar

Match Rank:9
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CYTGTGRTTA-
---GTCATTAG
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A A C G T
A C G T A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G

SPT2/SPT2_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CYTGTGRTTA-
CCTGTCTCTAA
 G T A C A G T C C G A T A C T G A C G T T A C G C T G A C A G T G C A T C G T A A C G T
G A T C G T A C C G A T C A T G C G A T G T A C A C G T G A T C A G C T C G T A G C T A