Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 87)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 333)	% of Background Sequences with Motif
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-47	-1.096e+02	0.0000	67.0	77.01%	10.9	3.27%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-46	-1.081e+02	0.0000	73.0	83.91%	21.2	6.36%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-46	-1.072e+02	0.0000	70.0	80.46%	16.2	4.85%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e-45	-1.045e+02	0.0000	69.0	79.31%	16.7	5.00%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-42	-9.711e+01	0.0000	69.0	79.31%	21.5	6.45%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-41	-9.572e+01	0.0000	70.0	80.46%	24.3	7.26%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e-41	-9.484e+01	0.0000	72.0	82.76%	29.5	8.85%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-39	-9.196e+01	0.0000	70.0	80.46%	27.8	8.31%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e-35	-8.263e+01	0.0000	69.0	79.31%	33.2	9.93%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e-33	-7.803e+01	0.0000	60.0	68.97%	19.7	5.89%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-30	-7.094e+01	0.0000	70.0	80.46%	48.8	14.60%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e-30	-7.019e+01	0.0000	57.0	65.52%	20.5	6.15%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-29	-6.840e+01	0.0000	65.0	74.71%	38.9	11.67%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e-27	-6.438e+01	0.0000	53.0	60.92%	18.8	5.64%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e-27	-6.359e+01	0.0000	61.0	70.11%	34.5	10.32%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-27	-6.292e+01	0.0000	73.0	83.91%	68.9	20.63%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-27	-6.291e+01	0.0000	51.0	58.62%	16.1	4.82%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-26	-6.030e+01	0.0000	62.0	71.26%	40.2	12.05%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-25	-5.966e+01	0.0000	50.0	57.47%	17.6	5.27%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e-24	-5.746e+01	0.0000	61.0	70.11%	41.7	12.48%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-23	-5.506e+01	0.0000	61.0	70.11%	44.5	13.32%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-23	-5.495e+01	0.0000	58.0	66.67%	37.1	11.13%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-23	-5.297e+01	0.0000	69.0	79.31%	70.0	20.97%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e-22	-5.262e+01	0.0000	52.0	59.77%	27.9	8.34%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-22	-5.087e+01	0.0000	35.0	40.23%	4.5	1.34%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-22	-5.078e+01	0.0000	44.0	50.57%	15.7	4.69%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-21	-5.039e+01	0.0000	62.0	71.26%	53.6	16.04%
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer	NCYAATAAAA	1e-21	-5.023e+01	0.0000	73.0	83.91%	89.8	26.89%
Tal1	CATCTG	1e-21	-4.971e+01	0.0000	62.0	71.26%	54.0	16.18%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e-21	-4.857e+01	0.0000	55.0	63.22%	38.9	11.64%
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer	CYHATAAAAN	1e-21	-4.847e+01	0.0000	82.0	94.25%	135.5	40.59%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-20	-4.831e+01	0.0000	66.0	75.86%	68.1	20.40%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-20	-4.669e+01	0.0000	82.0	94.25%	139.2	41.69%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e-19	-4.484e+01	0.0000	66.0	75.86%	74.2	22.22%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e-19	-4.444e+01	0.0000	56.0	64.37%	46.1	13.81%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e-19	-4.410e+01	0.0000	52.0	59.77%	37.3	11.16%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e-18	-4.274e+01	0.0000	55.0	63.22%	47.0	14.07%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e-18	-4.209e+01	0.0000	68.0	78.16%	86.2	25.82%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e-17	-4.009e+01	0.0000	53.0	60.92%	45.9	13.74%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e-17	-4.003e+01	0.0000	62.0	71.26%	70.7	21.18%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e-17	-4.000e+01	0.0000	61.0	70.11%	67.5	20.22%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e-17	-3.918e+01	0.0000	38.0	43.68%	16.4	4.92%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-16	-3.826e+01	0.0000	78.0	89.66%	137.8	41.26%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e-16	-3.706e+01	0.0000	31.0	35.63%	8.4	2.51%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e-15	-3.637e+01	0.0000	56.0	64.37%	59.1	17.70%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-15	-3.630e+01	0.0000	61.0	70.11%	74.7	22.37%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-15	-3.594e+01	0.0000	55.0	63.22%	57.4	17.20%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e-15	-3.520e+01	0.0000	57.0	65.52%	64.5	19.33%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-14	-3.445e+01	0.0000	46.0	52.87%	37.9	11.36%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-14	-3.352e+01	0.0000	62.0	71.26%	83.3	24.96%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-14	-3.313e+01	0.0000	46.0	52.87%	39.0	11.70%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e-14	-3.291e+01	0.0000	53.0	60.92%	58.0	17.36%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e-13	-3.210e+01	0.0000	28.0	32.18%	8.8	2.63%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-13	-3.208e+01	0.0000	70.0	80.46%	116.7	34.96%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e-13	-3.175e+01	0.0000	54.0	62.07%	62.1	18.60%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-13	-3.167e+01	0.0000	57.0	65.52%	71.9	21.55%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e-13	-3.109e+01	0.0000	31.0	35.63%	13.7	4.09%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e-13	-3.104e+01	0.0000	63.0	72.41%	92.5	27.70%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-13	-3.006e+01	0.0000	48.0	55.17%	49.1	14.70%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e-13	-3.002e+01	0.0000	51.0	58.62%	57.8	17.30%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-13	-3.000e+01	0.0000	74.0	85.06%	140.0	41.92%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-13	-2.994e+01	0.0000	25.0	28.74%	6.9	2.07%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-12	-2.957e+01	0.0000	62.0	71.26%	92.3	27.64%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e-12	-2.900e+01	0.0000	40.0	45.98%	32.1	9.61%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e-12	-2.896e+01	0.0000	69.0	79.31%	120.6	36.11%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-12	-2.878e+01	0.0000	49.0	56.32%	54.2	16.22%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-12	-2.832e+01	0.0000	24.0	27.59%	6.9	2.07%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-12	-2.825e+01	0.0000	35.0	40.23%	23.2	6.96%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e-11	-2.745e+01	0.0000	53.0	60.92%	68.9	20.62%
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer	RTGATTKATRGN	1e-11	-2.715e+01	0.0000	50.0	57.47%	60.1	17.99%
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer	BCCWTTGTBYKV	1e-11	-2.699e+01	0.0000	59.0	67.82%	88.3	26.46%
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer	MCAGCTGBYH	1e-11	-2.678e+01	0.0000	46.0	52.87%	50.2	15.02%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-11	-2.628e+01	0.0000	32.0	36.78%	20.1	6.03%
SeqBias: GA-repeat	GAGAGAGAGA	1e-11	-2.618e+01	0.0000	84.0	96.55%	208.0	62.31%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-11	-2.609e+01	0.0000	47.0	54.02%	54.0	16.19%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e-11	-2.607e+01	0.0000	35.0	40.23%	26.8	8.03%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-11	-2.597e+01	0.0000	45.0	51.72%	49.5	14.82%
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer	VGCCATAAAA	1e-11	-2.594e+01	0.0000	73.0	83.91%	146.8	43.96%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e-11	-2.585e+01	0.0000	74.0	85.06%	151.9	45.49%
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer	CYRCATTCCA	1e-11	-2.560e+01	0.0000	47.0	54.02%	55.5	16.64%
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer	VDGGGYGGGGCY	1e-11	-2.560e+01	0.0000	28.0	32.18%	14.4	4.32%
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer	YGGCCCCGCCCC	1e-11	-2.550e+01	0.0000	37.0	42.53%	31.3	9.38%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-11	-2.537e+01	0.0000	49.0	56.32%	61.8	18.50%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e-10	-2.527e+01	0.0000	46.0	52.87%	53.3	15.98%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e-10	-2.446e+01	0.0000	70.0	80.46%	137.5	41.19%
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer	GGYAATGAAA	1e-10	-2.439e+01	0.0000	43.0	49.43%	47.7	14.28%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-10	-2.402e+01	0.0000	49.0	56.32%	64.4	19.28%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e-10	-2.359e+01	0.0000	65.0	74.71%	119.2	35.69%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e-10	-2.330e+01	0.0000	71.0	81.61%	145.2	43.48%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-9	-2.277e+01	0.0000	30.0	34.48%	21.6	6.48%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e-9	-2.273e+01	0.0000	73.0	83.91%	156.2	46.80%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-9	-2.272e+01	0.0000	33.0	37.93%	27.9	8.36%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-9	-2.272e+01	0.0000	33.0	37.93%	27.5	8.23%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e-9	-2.228e+01	0.0000	35.0	40.23%	32.1	9.61%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-9	-2.202e+01	0.0000	37.0	42.53%	37.6	11.28%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-9	-2.159e+01	0.0000	34.0	39.08%	31.9	9.54%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-9	-2.145e+01	0.0000	74.0	85.06%	165.8	49.67%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-8	-2.061e+01	0.0000	35.0	40.23%	35.7	10.70%
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer	TTTTATGGCM	1e-8	-2.048e+01	0.0000	68.0	78.16%	141.0	42.24%
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer	HAWGRGGCCM	1e-8	-2.030e+01	0.0000	60.0	68.97%	110.8	33.18%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e-8	-2.013e+01	0.0000	17.0	19.54%	4.9	1.48%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-8	-1.977e+01	0.0000	52.0	59.77%	84.0	25.17%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-8	-1.953e+01	0.0000	12.0	13.79%	0.8	0.24%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-8	-1.953e+01	0.0000	12.0	13.79%	0.8	0.24%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-8	-1.877e+01	0.0000	13.0	14.94%	1.4	0.42%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-8	-1.861e+01	0.0000	16.0	18.39%	4.4	1.32%
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer	TRCATTCCAG	1e-8	-1.849e+01	0.0000	48.0	55.17%	75.9	22.74%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e-7	-1.831e+01	0.0000	51.0	58.62%	85.9	25.74%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e-7	-1.831e+01	0.0000	58.0	66.67%	109.2	32.69%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e-7	-1.796e+01	0.0000	56.0	64.37%	103.4	30.97%
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer	TGTTTAYTTAGC	1e-7	-1.794e+01	0.0000	31.0	35.63%	31.8	9.52%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e-7	-1.765e+01	0.0000	51.0	58.62%	87.1	26.07%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-7	-1.762e+01	0.0000	26.0	29.89%	21.4	6.42%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-7	-1.738e+01	0.0000	39.0	44.83%	52.5	15.72%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-7	-1.711e+01	0.0000	15.0	17.24%	4.4	1.32%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-7	-1.701e+01	0.0000	36.0	41.38%	45.1	13.50%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e-7	-1.659e+01	0.0000	36.0	41.38%	46.7	14.00%
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer	NHRTCACGACDN	1e-7	-1.637e+01	0.0000	51.0	58.62%	91.2	27.32%
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer	NRBCARRGGTCA	1e-7	-1.612e+01	0.0000	40.0	45.98%	58.1	17.40%
SeqBias: TA-repeat	TATATATATA	1e-6	-1.577e+01	0.0000	62.0	71.26%	133.5	39.99%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-6	-1.547e+01	0.0000	33.0	37.93%	41.5	12.42%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-6	-1.544e+01	0.0000	47.0	54.02%	81.0	24.27%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e-6	-1.534e+01	0.0000	59.0	67.82%	123.4	36.97%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-6	-1.517e+01	0.0000	29.0	33.33%	32.5	9.74%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-6	-1.503e+01	0.0000	45.0	51.72%	76.7	22.98%
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer	GGCMATGAAA	1e-6	-1.489e+01	0.0000	37.0	42.53%	53.1	15.90%
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer	NDCTAATTAS	1e-6	-1.477e+01	0.0000	65.0	74.71%	149.5	44.77%
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer	NNNTAATTAS	1e-6	-1.473e+01	0.0000	61.0	70.11%	133.6	40.02%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-6	-1.448e+01	0.0000	68.0	78.16%	163.3	48.91%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e-6	-1.441e+01	0.0000	45.0	51.72%	78.5	23.51%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e-6	-1.422e+01	0.0000	47.0	54.02%	85.1	25.50%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-6	-1.401e+01	0.0000	30.0	34.48%	37.2	11.13%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-5	-1.350e+01	0.0000	70.0	80.46%	176.8	52.94%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e-5	-1.349e+01	0.0000	22.0	25.29%	20.8	6.24%
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer	CTCCCTGGGAGGCCN	1e-5	-1.334e+01	0.0000	26.0	29.89%	29.1	8.70%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e-5	-1.320e+01	0.0000	86.0	98.85%	270.6	81.06%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-5	-1.314e+01	0.0000	37.0	42.53%	58.8	17.60%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-5	-1.262e+01	0.0000	24.0	27.59%	26.9	8.07%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e-5	-1.247e+01	0.0000	40.0	45.98%	69.4	20.78%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e-5	-1.240e+01	0.0000	18.0	20.69%	14.3	4.27%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e-5	-1.238e+01	0.0000	45.0	51.72%	85.8	25.69%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-5	-1.173e+01	0.0001	14.0	16.09%	8.3	2.49%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e-4	-1.145e+01	0.0001	51.0	58.62%	109.3	32.73%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e-4	-1.125e+01	0.0001	17.0	19.54%	14.5	4.35%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-4	-1.116e+01	0.0001	71.0	81.61%	191.6	57.38%
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer	HDGYAATGAAAN	1e-4	-1.110e+01	0.0001	48.0	55.17%	100.2	30.02%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e-4	-1.090e+01	0.0001	21.0	24.14%	23.2	6.95%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e-4	-1.068e+01	0.0002	17.0	19.54%	15.6	4.67%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-4	-1.045e+01	0.0002	21.0	24.14%	25.0	7.48%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e-4	-1.044e+01	0.0002	29.0	33.33%	44.2	13.25%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e-4	-1.025e+01	0.0002	81.0	93.10%	247.4	74.12%
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer	TGATKGATGR	1e-4	-1.013e+01	0.0003	16.0	18.39%	14.1	4.21%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-4	-1.013e+01	0.0003	16.0	18.39%	14.5	4.35%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e-4	-9.727e+00	0.0004	63.0	72.41%	163.8	49.07%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-4	-9.618e+00	0.0004	36.0	41.38%	67.5	20.22%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-4	-9.610e+00	0.0004	21.0	24.14%	26.7	7.99%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-4	-9.562e+00	0.0005	41.0	47.13%	83.1	24.89%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e-4	-9.470e+00	0.0005	20.0	22.99%	24.0	7.19%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e-4	-9.340e+00	0.0006	34.0	39.08%	62.9	18.84%
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer	RGCAATNAAA	1e-3	-9.113e+00	0.0007	62.0	71.26%	163.0	48.81%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e-3	-8.820e+00	0.0009	32.0	36.78%	59.0	17.66%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e-3	-8.548e+00	0.0012	15.0	17.24%	15.9	4.76%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e-3	-8.387e+00	0.0014	18.0	20.69%	22.9	6.84%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e-3	-8.291e+00	0.0015	39.0	44.83%	82.4	24.68%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e-3	-8.264e+00	0.0016	17.0	19.54%	20.6	6.16%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e-3	-8.144e+00	0.0018	19.0	21.84%	25.9	7.74%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e-3	-8.085e+00	0.0019	34.0	39.08%	67.5	20.22%
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer	TATTGAYY	1e-3	-8.015e+00	0.0020	38.0	43.68%	80.2	24.01%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-3	-8.005e+00	0.0020	7.0	8.05%	2.7	0.80%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-3	-7.926e+00	0.0021	45.0	51.72%	105.0	31.44%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e-3	-7.595e+00	0.0030	33.0	37.93%	66.1	19.79%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e-3	-7.542e+00	0.0031	14.0	16.09%	15.6	4.66%
Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer	SSRGCAGCTGCH	1e-3	-7.499e+00	0.0032	11.0	12.64%	9.7	2.90%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e-3	-7.469e+00	0.0033	17.0	19.54%	22.5	6.74%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e-3	-7.469e+00	0.0033	17.0	19.54%	22.1	6.63%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e-3	-7.398e+00	0.0035	34.0	39.08%	70.4	21.07%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e-3	-7.331e+00	0.0037	16.0	18.39%	20.1	6.01%
CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer	TATCGATNAN	1e-3	-7.318e+00	0.0037	37.0	42.53%	80.8	24.20%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e-3	-7.291e+00	0.0038	56.0	64.37%	148.4	44.46%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-3	-7.276e+00	0.0039	23.0	26.44%	38.8	11.63%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-3	-7.079e+00	0.0047	29.0	33.33%	56.7	16.99%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e-3	-7.017e+00	0.0050	13.0	14.94%	14.4	4.33%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-2	-6.579e+00	0.0076	21.0	24.14%	35.6	10.67%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e-2	-6.579e+00	0.0076	21.0	24.14%	35.3	10.57%
HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer	TGCCAGCB	1e-2	-6.518e+00	0.0080	37.0	42.53%	84.0	25.17%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-2	-6.495e+00	0.0082	12.0	13.79%	13.1	3.93%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-2	-6.353e+00	0.0094	4.0	4.60%	0.7	0.21%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e-2	-6.286e+00	0.0100	18.0	20.69%	28.0	8.39%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-2	-6.251e+00	0.0103	16.0	18.39%	23.5	7.03%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e-2	-6.204e+00	0.0107	30.0	34.48%	63.6	19.05%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e-2	-6.031e+00	0.0127	31.0	35.63%	67.2	20.12%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e-2	-5.936e+00	0.0138	14.0	16.09%	19.4	5.82%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-2	-5.932e+00	0.0138	25.0	28.74%	49.4	14.81%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e-2	-5.873e+00	0.0146	46.0	52.87%	119.5	35.80%
SeqBias: CA-repeat	CACACACACA	1e-2	-5.818e+00	0.0153	57.0	65.52%	161.8	48.47%
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer	SSTAATTA	1e-2	-5.684e+00	0.0175	32.0	36.78%	72.9	21.84%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e-2	-5.515e+00	0.0206	17.0	19.54%	28.6	8.57%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e-2	-5.436e+00	0.0221	18.0	20.69%	31.7	9.51%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e-2	-5.376e+00	0.0234	19.0	21.84%	34.7	10.39%
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer	GKBCARAGGTCA	1e-2	-5.345e+00	0.0240	28.0	32.18%	61.5	18.41%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e-2	-5.293e+00	0.0252	12.0	13.79%	17.0	5.08%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e-2	-5.129e+00	0.0295	19.0	21.84%	35.5	10.63%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-2	-4.947e+00	0.0352	12.0	13.79%	17.9	5.35%
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer	VNAGGKCAAAGGTCA	1e-2	-4.928e+00	0.0355	18.0	20.69%	33.7	10.11%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e-2	-4.928e+00	0.0355	18.0	20.69%	33.7	10.09%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-2	-4.917e+00	0.0357	4.0	4.60%	1.6	0.48%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-2	-4.888e+00	0.0366	8.0	9.20%	8.1	2.42%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-2	-4.798e+00	0.0399	11.0	12.64%	15.5	4.64%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e-2	-4.786e+00	0.0402	16.0	18.39%	28.2	8.45%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e-2	-4.645e+00	0.0460	21.0	24.14%	43.3	12.97%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-1	-4.477e+00	0.0542	5.0	5.75%	4.0	1.19%
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer	NSNNTAATTA	1e-1	-4.443e+00	0.0558	45.0	51.72%	125.6	37.62%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-1	-4.403e+00	0.0578	27.0	31.03%	63.2	18.93%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e-1	-4.359e+00	0.0602	35.0	40.23%	90.2	27.01%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e-1	-4.247e+00	0.0670	18.0	20.69%	36.7	10.99%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e-1	-4.057e+00	0.0806	21.0	24.14%	46.7	14.00%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e-1	-4.043e+00	0.0814	49.0	56.32%	143.0	42.84%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e-1	-3.999e+00	0.0846	36.0	41.38%	97.0	29.05%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-3.852e+00	0.0976	6.0	6.90%	6.8	2.04%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e-1	-3.839e+00	0.0984	18.0	20.69%	38.5	11.52%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e-1	-3.700e+00	0.1125	21.0	24.14%	48.4	14.51%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e-1	-3.673e+00	0.1151	25.0	28.74%	61.6	18.46%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e-1	-3.673e+00	0.1151	8.0	9.20%	11.8	3.55%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e-1	-3.667e+00	0.1151	33.0	37.93%	88.7	26.56%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e-1	-3.581e+00	0.1245	71.0	81.61%	236.2	70.74%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e-1	-3.566e+00	0.1259	26.0	29.89%	65.5	19.62%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-3.547e+00	0.1277	31.0	35.63%	82.7	24.76%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-1	-3.483e+00	0.1350	19.0	21.84%	43.8	13.13%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e-1	-3.483e+00	0.1350	19.0	21.84%	43.0	12.88%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e-1	-3.369e+00	0.1505	21.0	24.14%	50.6	15.16%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e-1	-3.327e+00	0.1563	5.0	5.75%	5.6	1.69%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-1	-3.316e+00	0.1574	4.0	4.60%	3.1	0.94%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-3.307e+00	0.1582	75.0	86.21%	256.1	76.70%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-3.274e+00	0.1627	47.0	54.02%	142.2	42.58%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-1	-3.256e+00	0.1651	15.0	17.24%	32.7	9.78%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e-1	-3.185e+00	0.1764	7.0	8.05%	10.8	3.24%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e-1	-3.158e+00	0.1805	2.0	2.30%	0.6	0.19%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-1	-3.102e+00	0.1901	22.0	25.29%	55.3	16.55%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-1	-3.082e+00	0.1930	16.0	18.39%	36.7	10.99%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e-1	-3.063e+00	0.1960	21.0	24.14%	52.6	15.75%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e-1	-2.935e+00	0.2217	17.0	19.54%	40.5	12.14%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e-1	-2.897e+00	0.2294	5.0	5.75%	6.2	1.85%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-2.893e+00	0.2294	15.0	17.24%	34.6	10.35%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-1	-2.883e+00	0.2308	26.0	29.89%	70.4	21.07%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e-1	-2.879e+00	0.2308	20.0	22.99%	50.0	14.98%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e-1	-2.876e+00	0.2308	12.0	13.79%	25.2	7.54%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e-1	-2.822e+00	0.2423	22.0	25.29%	57.3	17.16%
SeqBias: CG bias	SSSSSSSSSS	1e-1	-2.816e+00	0.2428	84.0	96.55%	303.9	91.03%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e-1	-2.809e+00	0.2436	18.0	20.69%	45.0	13.47%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e-1	-2.783e+00	0.2490	8.0	9.20%	14.5	4.34%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e-1	-2.779e+00	0.2490	21.0	24.14%	54.7	16.39%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-1	-2.778e+00	0.2490	17.0	19.54%	41.7	12.49%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-1	-2.778e+00	0.2490	17.0	19.54%	41.8	12.53%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-1	-2.738e+00	0.2563	20.0	22.99%	51.1	15.31%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e-1	-2.645e+00	0.2802	21.0	24.14%	55.2	16.52%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.595e+00	0.2932	16.0	18.39%	39.2	11.74%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e-1	-2.566e+00	0.3006	15.0	17.24%	36.7	11.00%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e-1	-2.533e+00	0.3098	5.0	5.75%	7.1	2.14%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e-1	-2.516e+00	0.3138	21.0	24.14%	56.9	17.04%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e-1	-2.391e+00	0.3541	42.0	48.28%	132.3	39.63%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-1	-2.374e+00	0.3590	31.0	35.63%	92.7	27.77%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e-1	-2.358e+00	0.3632	13.0	14.94%	31.4	9.39%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e-1	-2.346e+00	0.3647	17.0	19.54%	44.9	13.45%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e-1	-2.346e+00	0.3647	17.0	19.54%	44.0	13.18%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-2.346e+00	0.3647	7.0	8.05%	13.5	4.04%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e-1	-2.318e+00	0.3725	11.0	12.64%	25.7	7.70%
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer	GGTCACCTGAGGTCA	1e-1	-2.316e+00	0.3725	8.0	9.20%	16.4	4.92%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1	-2.305e+00	0.3745	9.0	10.34%	19.7	5.91%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-2.241e+00	0.3978	3.0	3.45%	3.4	1.01%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	-2.221e+00	0.4043	5.0	5.75%	8.2	2.45%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e0	-2.199e+00	0.4119	26.0	29.89%	76.9	23.04%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e0	-2.111e+00	0.4481	20.0	22.99%	56.0	16.78%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-2.027e+00	0.4854	12.0	13.79%	30.2	9.05%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-1.993e+00	0.4987	22.0	25.29%	64.5	19.31%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e0	-1.993e+00	0.4987	22.0	25.29%	64.5	19.33%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e0	-1.971e+00	0.5076	17.0	19.54%	47.1	14.12%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e0	-1.906e+00	0.5401	26.0	29.89%	79.5	23.82%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.887e+00	0.5485	12.0	13.79%	31.2	9.34%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e0	-1.881e+00	0.5494	53.0	60.92%	180.3	54.01%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.845e+00	0.5675	19.0	21.84%	55.3	16.55%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	-1.750e+00	0.6224	17.0	19.54%	49.7	14.88%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e0	-1.738e+00	0.6271	31.0	35.63%	99.3	29.73%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e0	-1.720e+00	0.6363	14.0	16.09%	39.6	11.87%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	-1.695e+00	0.6503	20.0	22.99%	60.2	18.02%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e0	-1.678e+00	0.6593	75.0	86.21%	271.1	81.20%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.600e+00	0.7080	8.0	9.20%	20.3	6.09%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	-1.600e+00	0.7080	8.0	9.20%	20.4	6.10%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e0	-1.597e+00	0.7080	18.0	20.69%	54.1	16.19%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-1.574e+00	0.7080	1.0	1.15%	0.0	0.00%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-1.574e+00	0.7080	1.0	1.15%	0.0	0.00%
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.574e+00	0.7080	1.0	1.15%	0.6	0.19%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.574e+00	0.7080	1.0	1.15%	0.0	0.00%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.574e+00	0.7080	1.0	1.15%	0.8	0.25%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.574e+00	0.7080	1.0	1.15%	0.7	0.21%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	-1.574e+00	0.7080	1.0	1.15%	0.5	0.14%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	-1.574e+00	0.7080	1.0	1.15%	0.0	0.00%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e0	-1.574e+00	0.7080	1.0	1.15%	0.6	0.17%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-1.536e+00	0.7267	6.0	6.90%	14.1	4.21%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.504e+00	0.7480	4.0	4.60%	8.1	2.41%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	-1.421e+00	0.8101	10.0	11.49%	28.3	8.49%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e0	-1.406e+00	0.8196	16.0	18.39%	49.5	14.83%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e0	-1.395e+00	0.8256	46.0	52.87%	160.5	48.07%
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer	TTGAMCTTTG	1e0	-1.311e+00	0.8947	34.0	39.08%	116.9	35.01%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-1.299e+00	0.8972	4.0	4.60%	9.4	2.83%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-1.299e+00	0.8972	4.0	4.60%	9.7	2.91%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	-1.299e+00	0.8972	4.0	4.60%	9.1	2.74%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.284e+00	0.9018	2.0	2.30%	3.8	1.14%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e0	-1.284e+00	0.9018	2.0	2.30%	3.2	0.96%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e0	-1.284e+00	0.9018	2.0	2.30%	3.7	1.10%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.274e+00	0.9048	3.0	3.45%	6.7	2.00%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.274e+00	0.9048	3.0	3.45%	6.1	1.82%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.227e+00	0.9426	6.0	6.90%	16.2	4.85%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e0	-1.227e+00	0.9426	6.0	6.90%	16.6	4.97%
SeqBias: A/T bias	WWWWWWWWWW	1e0	-1.211e+00	0.9543	86.0	98.85%	323.8	96.98%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e0	-1.201e+00	0.9613	17.0	19.54%	55.1	16.52%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.194e+00	0.9649	20.0	22.99%	66.1	19.81%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.168e+00	0.9874	13.0	14.94%	41.4	12.41%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.076e+00	1.0000	16.0	18.39%	54.0	16.17%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e0	-1.069e+00	1.0000	30.0	34.48%	105.1	31.47%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e0	-1.036e+00	1.0000	5.0	5.75%	14.7	4.39%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e0	-1.030e+00	1.0000	18.0	20.69%	61.1	18.29%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.015e+00	1.0000	2.0	2.30%	4.2	1.25%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	-1.015e+00	1.0000	2.0	2.30%	4.3	1.28%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e0	-9.895e-01	1.0000	1.0	1.15%	1.3	0.39%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e0	-9.895e-01	1.0000	1.0	1.15%	1.4	0.41%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	-9.895e-01	1.0000	1.0	1.15%	1.3	0.40%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e0	-9.831e-01	1.0000	17.0	19.54%	58.8	17.62%
PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer	YCCDNTCCAGGTTTT	1e0	-9.295e-01	1.0000	13.0	14.94%	44.0	13.18%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e0	-9.295e-01	1.0000	13.0	14.94%	44.3	13.27%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e0	-9.000e-01	1.0000	8.0	9.20%	27.0	8.07%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-8.999e-01	1.0000	3.0	3.45%	8.5	2.54%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e0	-8.999e-01	1.0000	3.0	3.45%	8.2	2.47%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e0	-8.721e-01	1.0000	16.0	18.39%	56.1	16.81%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e0	-8.583e-01	1.0000	71.0	81.61%	267.0	79.97%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-8.368e-01	1.0000	42.0	48.28%	155.4	46.55%
ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer	GNMCAGGTGTGC	1e0	-8.150e-01	1.0000	8.0	9.20%	27.4	8.21%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-8.114e-01	1.0000	16.0	18.39%	57.8	17.31%
ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer	GGAACAGCCG	1e0	-8.042e-01	1.0000	5.0	5.75%	16.3	4.88%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e0	-7.813e-01	1.0000	23.0	26.44%	84.3	25.24%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e0	-7.725e-01	1.0000	50.0	57.47%	187.9	56.29%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-7.599e-01	1.0000	11.0	12.64%	39.6	11.86%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	-7.599e-01	1.0000	11.0	12.64%	39.6	11.86%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-7.593e-01	1.0000	3.0	3.45%	9.9	2.96%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e0	-7.593e-01	1.0000	3.0	3.45%	9.3	2.78%
Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer	CTTTGATGTGSB	1e0	-7.549e-01	1.0000	7.0	8.05%	24.1	7.22%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e0	-7.457e-01	1.0000	12.0	13.79%	43.4	13.00%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-6.881e-01	1.0000	1.0	1.15%	3.0	0.89%
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer	YSTGGGTGGTCT	1e0	-6.881e-01	1.0000	1.0	1.15%	3.0	0.88%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-6.881e-01	1.0000	1.0	1.15%	2.7	0.80%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e0	-6.881e-01	1.0000	1.0	1.15%	2.2	0.67%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-6.558e-01	1.0000	2.0	2.30%	6.7	2.00%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-6.558e-01	1.0000	2.0	2.30%	6.8	2.03%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-6.558e-01	1.0000	2.0	2.30%	6.1	1.84%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e0	-6.558e-01	1.0000	2.0	2.30%	6.8	2.03%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-6.460e-01	1.0000	10.0	11.49%	37.5	11.22%
TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer	AGATAAGANN	1e0	-6.301e-01	1.0000	42.0	48.28%	160.5	48.08%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-6.143e-01	1.0000	6.0	6.90%	22.9	6.86%
ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer	CTGCCWVCTTTTRTA	1e0	-6.071e-01	1.0000	7.0	8.05%	26.8	8.04%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-5.717e-01	1.0000	21.0	24.14%	81.4	24.37%
SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer	GCAACAGGTG	1e0	-5.422e-01	1.0000	3.0	3.45%	11.1	3.34%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e0	-5.418e-01	1.0000	19.0	21.84%	74.9	22.44%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e0	-5.231e-01	1.0000	23.0	26.44%	90.1	26.98%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e0	-5.152e-01	1.0000	38.0	43.68%	148.7	44.53%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-5.004e-01	1.0000	1.0	1.15%	3.4	1.03%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e0	-5.004e-01	1.0000	1.0	1.15%	3.2	0.95%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e0	-4.866e-01	1.0000	8.0	9.20%	32.7	9.79%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-4.856e-01	1.0000	7.0	8.05%	28.9	8.67%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-4.795e-01	1.0000	25.0	28.74%	99.0	29.66%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e0	-4.633e-01	1.0000	29.0	33.33%	115.9	34.70%
PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer	TGGTACATTCCA	1e0	-4.585e-01	1.0000	3.0	3.45%	12.3	3.67%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e0	-4.585e-01	1.0000	3.0	3.45%	12.4	3.73%
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer	SMCATCTGKH	1e0	-4.413e-01	1.0000	11.0	12.64%	45.8	13.72%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e0	-4.394e-01	1.0000	9.0	10.34%	37.2	11.15%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e0	-4.336e-01	1.0000	18.0	20.69%	73.7	22.06%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-4.332e-01	1.0000	2.0	2.30%	8.3	2.50%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e0	-4.243e-01	1.0000	22.0	25.29%	89.2	26.73%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e0	-4.189e-01	1.0000	24.0	27.59%	97.9	29.34%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e0	-4.172e-01	1.0000	45.0	51.72%	178.6	53.49%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-4.160e-01	1.0000	25.0	28.74%	101.8	30.50%
Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer	TRCACCTGCY	1e0	-4.072e-01	1.0000	4.0	4.60%	18.0	5.39%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e0	-3.730e-01	1.0000	1.0	1.15%	4.4	1.31%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e0	-3.730e-01	1.0000	1.0	1.15%	4.9	1.47%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e0	-3.571e-01	1.0000	26.0	29.89%	107.3	32.15%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-3.536e-01	1.0000	2.0	2.30%	9.3	2.77%
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer	CHCAGCRGGRGG	1e0	-3.536e-01	1.0000	2.0	2.30%	9.6	2.88%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	-3.536e-01	1.0000	2.0	2.30%	9.7	2.92%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-3.509e-01	1.0000	8.0	9.20%	35.5	10.63%
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer	DGCACACGTG	1e0	-3.204e-01	1.0000	9.0	10.34%	40.5	12.14%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-3.024e-01	1.0000	4.0	4.60%	19.4	5.80%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-3.024e-01	1.0000	4.0	4.60%	19.4	5.82%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e0	-2.936e-01	1.0000	10.0	11.49%	45.8	13.71%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e0	-2.936e-01	1.0000	10.0	11.49%	45.1	13.50%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-2.891e-01	1.0000	2.0	2.30%	10.9	3.26%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.825e-01	1.0000	1.0	1.15%	5.5	1.66%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	-2.825e-01	1.0000	1.0	1.15%	5.5	1.64%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-2.825e-01	1.0000	1.0	1.15%	5.1	1.54%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e0	-2.556e-01	1.0000	31.0	35.63%	131.9	39.50%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e0	-2.439e-01	1.0000	21.0	24.14%	92.4	27.68%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.365e-01	1.0000	2.0	2.30%	11.2	3.35%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e0	-2.365e-01	1.0000	2.0	2.30%	11.6	3.47%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e0	-2.352e-01	1.0000	15.0	17.24%	68.5	20.51%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.331e-01	1.0000	3.0	3.45%	16.0	4.81%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e0	-2.245e-01	1.0000	24.0	27.59%	105.2	31.51%
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer	NDGTAATTAC	1e0	-2.242e-01	1.0000	12.0	13.79%	56.2	16.84%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-2.220e-01	1.0000	19.0	21.84%	85.9	25.73%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e0	-2.185e-01	1.0000	39.0	44.83%	164.1	49.14%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-2.161e-01	1.0000	1.0	1.15%	6.9	2.05%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-2.161e-01	1.0000	1.0	1.15%	6.8	2.04%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-2.161e-01	1.0000	1.0	1.15%	6.2	1.85%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-2.106e-01	1.0000	14.0	16.09%	65.5	19.61%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e0	-2.055e-01	1.0000	9.0	10.34%	44.1	13.21%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.988e-01	1.0000	6.0	6.90%	31.1	9.31%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e0	-1.935e-01	1.0000	2.0	2.30%	12.9	3.86%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e0	-1.935e-01	1.0000	2.0	2.30%	12.2	3.65%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e0	-1.935e-01	1.0000	2.0	2.30%	12.0	3.60%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.908e-01	1.0000	14.0	16.09%	66.8	20.00%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e0	-1.905e-01	1.0000	10.0	11.49%	49.8	14.91%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.864e-01	1.0000	7.0	8.05%	36.2	10.86%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.766e-01	1.0000	11.0	12.64%	54.8	16.40%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	-1.744e-01	1.0000	8.0	9.20%	41.2	12.35%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.739e-01	1.0000	6.0	6.90%	32.2	9.63%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.666e-01	1.0000	1.0	1.15%	7.6	2.26%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.666e-01	1.0000	1.0	1.15%	7.1	2.13%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e0	-1.652e-01	1.0000	3.0	3.45%	18.4	5.52%
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer	NAMCAGCTGK	1e0	-1.641e-01	1.0000	7.0	8.05%	37.5	11.23%
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer	GTGACCTTGRVN	1e0	-1.637e-01	1.0000	4.0	4.60%	23.0	6.90%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-1.637e-01	1.0000	4.0	4.60%	23.4	7.02%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e0	-1.637e-01	1.0000	4.0	4.60%	23.1	6.93%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e0	-1.585e-01	1.0000	23.0	26.44%	105.3	31.55%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-1.583e-01	1.0000	2.0	2.30%	13.4	4.01%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-1.583e-01	1.0000	2.0	2.30%	13.3	3.98%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e0	-1.469e-01	1.0000	12.0	13.79%	60.9	18.24%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-1.387e-01	1.0000	3.0	3.45%	19.0	5.70%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-1.387e-01	1.0000	3.0	3.45%	19.4	5.81%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e0	-1.332e-01	1.0000	28.0	32.18%	127.9	38.32%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e0	-1.295e-01	1.0000	2.0	2.30%	14.3	4.28%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.290e-01	1.0000	1.0	1.15%	8.9	2.66%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.290e-01	1.0000	1.0	1.15%	9.0	2.69%
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer	MCTCCCMCRCAB	1e0	-1.290e-01	1.0000	1.0	1.15%	8.4	2.50%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e0	-1.242e-01	1.0000	47.0	54.02%	201.0	60.21%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-1.226e-01	1.0000	17.0	19.54%	83.2	24.92%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.192e-01	1.0000	4.0	4.60%	25.5	7.64%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.177e-01	1.0000	12.0	13.79%	62.6	18.75%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.163e-01	1.0000	3.0	3.45%	20.9	6.26%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-1.163e-01	1.0000	3.0	3.45%	20.0	6.00%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e0	-1.134e-01	1.0000	14.0	16.09%	71.9	21.53%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e0	-1.134e-01	1.0000	14.0	16.09%	71.1	21.30%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e0	-1.082e-01	1.0000	22.0	25.29%	105.9	31.71%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e0	-1.075e-01	1.0000	34.0	39.08%	153.0	45.84%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.058e-01	1.0000	2.0	2.30%	15.2	4.54%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	-1.058e-01	1.0000	2.0	2.30%	15.9	4.77%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e0	-1.054e-01	1.0000	8.0	9.20%	45.8	13.73%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer	NNAYTTCCTGHN	1e0	-1.014e-01	1.0000	4.0	4.60%	26.3	7.87%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.003e-01	1.0000	1.0	1.15%	9.7	2.91%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-1.003e-01	1.0000	1.0	1.15%	9.0	2.71%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e0	-1.003e-01	1.0000	1.0	1.15%	9.3	2.78%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	-1.003e-01	1.0000	1.0	1.15%	9.9	2.95%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e0	-8.723e-02	1.0000	16.0	18.39%	82.1	24.58%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-8.636e-02	1.0000	6.0	6.90%	37.8	11.32%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-8.636e-02	1.0000	6.0	6.90%	37.3	11.17%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-7.814e-02	1.0000	1.0	1.15%	10.5	3.14%
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer	TTAACCCTTTVNKKN	1e0	-7.814e-02	1.0000	1.0	1.15%	10.0	3.00%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e0	-7.814e-02	1.0000	1.0	1.15%	10.5	3.15%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e0	-7.814e-02	1.0000	1.0	1.15%	10.9	3.26%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	-7.083e-02	1.0000	8.0	9.20%	48.6	14.57%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-7.044e-02	1.0000	2.0	2.30%	17.9	5.37%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-7.044e-02	1.0000	2.0	2.30%	17.5	5.25%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e0	-7.044e-02	1.0000	2.0	2.30%	17.4	5.21%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-6.789e-02	1.0000	3.0	3.45%	23.5	7.04%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e0	-6.752e-02	1.0000	32.0	36.78%	150.9	45.21%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e0	-6.737e-02	1.0000	15.0	17.24%	80.8	24.21%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-6.436e-02	1.0000	6.0	6.90%	39.7	11.88%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-6.399e-02	1.0000	5.0	5.75%	34.7	10.39%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-6.399e-02	1.0000	5.0	5.75%	34.7	10.40%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-6.100e-02	1.0000	1.0	1.15%	11.0	3.30%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e0	-6.100e-02	1.0000	1.0	1.15%	11.8	3.53%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e0	-5.539e-02	1.0000	6.0	6.90%	40.0	11.99%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-5.499e-02	1.0000	7.0	8.05%	45.9	13.75%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-5.499e-02	1.0000	7.0	8.05%	45.7	13.70%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e0	-5.378e-02	1.0000	8.0	9.20%	50.1	15.02%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e0	-5.107e-02	1.0000	12.0	13.79%	69.0	20.67%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e0	-4.999e-02	1.0000	29.0	33.33%	141.1	42.27%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-4.904e-02	1.0000	25.0	28.74%	125.4	37.56%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-4.768e-02	1.0000	1.0	1.15%	12.2	3.66%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	-4.768e-02	1.0000	1.0	1.15%	12.7	3.79%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e0	-4.768e-02	1.0000	1.0	1.15%	12.9	3.85%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e0	-4.737e-02	1.0000	15.0	17.24%	83.8	25.10%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	-4.668e-02	1.0000	2.0	2.30%	19.0	5.70%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e0	-4.668e-02	1.0000	2.0	2.30%	19.1	5.73%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-4.651e-02	1.0000	5.0	5.75%	36.6	10.96%
Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer	ACTTCCKGKT	1e0	-4.388e-02	1.0000	4.0	4.60%	31.7	9.48%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-4.388e-02	1.0000	4.0	4.60%	31.7	9.49%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e0	-4.076e-02	1.0000	6.0	6.90%	42.9	12.85%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-3.898e-02	1.0000	3.0	3.45%	26.9	8.05%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e0	-3.898e-02	1.0000	3.0	3.45%	26.9	8.06%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e0	-3.898e-02	1.0000	3.0	3.45%	26.4	7.90%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-3.793e-02	1.0000	2.0	2.30%	20.8	6.24%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-3.793e-02	1.0000	2.0	2.30%	20.8	6.24%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e0	-3.793e-02	1.0000	2.0	2.30%	20.9	6.26%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e0	-3.793e-02	1.0000	2.0	2.30%	20.1	6.03%
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer	CCTTTGATST	1e0	-3.689e-02	1.0000	4.0	4.60%	32.6	9.76%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-3.486e-02	1.0000	6.0	6.90%	43.9	13.15%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-3.228e-02	1.0000	3.0	3.45%	27.5	8.22%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e0	-3.228e-02	1.0000	3.0	3.45%	27.6	8.25%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e0	-3.168e-02	1.0000	20.0	22.99%	108.5	32.49%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-3.094e-02	1.0000	4.0	4.60%	33.9	10.14%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e0	-3.094e-02	1.0000	4.0	4.60%	33.8	10.12%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-3.094e-02	1.0000	4.0	4.60%	33.2	9.93%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-3.077e-02	1.0000	2.0	2.30%	21.1	6.33%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	-3.077e-02	1.0000	2.0	2.30%	21.7	6.49%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e0	-3.040e-02	1.0000	12.0	13.79%	73.5	22.02%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.918e-02	1.0000	1.0	1.15%	14.8	4.42%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e0	-2.918e-02	1.0000	1.0	1.15%	14.6	4.37%
REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer	TVCTCTGTTT	1e0	-2.918e-02	1.0000	1.0	1.15%	15.0	4.48%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-2.826e-02	1.0000	33.0	37.93%	162.1	48.55%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-2.687e-02	1.0000	16.0	18.39%	92.5	27.72%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-2.668e-02	1.0000	3.0	3.45%	28.1	8.42%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-2.668e-02	1.0000	3.0	3.45%	28.9	8.66%
ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer	ACCGGAAGTG	1e0	-2.598e-02	1.0000	7.0	8.05%	50.0	14.99%
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer	TYTGACCASWRG	1e0	-2.591e-02	1.0000	4.0	4.60%	34.1	10.21%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	-2.591e-02	1.0000	4.0	4.60%	34.1	10.22%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e0	-2.591e-02	1.0000	4.0	4.60%	34.7	10.40%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-2.493e-02	1.0000	2.0	2.30%	23.0	6.88%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-2.493e-02	1.0000	2.0	2.30%	22.1	6.62%
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer	NABTCCCWDGGGAVH	1e0	-2.284e-02	1.0000	1.0	1.15%	15.9	4.75%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e0	-2.201e-02	1.0000	3.0	3.45%	29.5	8.83%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e0	-2.201e-02	1.0000	3.0	3.45%	29.1	8.72%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-2.165e-02	1.0000	4.0	4.60%	35.5	10.62%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e0	-2.017e-02	1.0000	2.0	2.30%	23.4	7.02%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e0	-1.950e-02	1.0000	40.0	45.98%	192.9	57.78%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e0	-1.926e-02	1.0000	17.0	19.54%	99.1	29.68%
Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer	DAGGTGTBAA	1e0	-1.898e-02	1.0000	7.0	8.05%	52.3	15.66%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.788e-02	1.0000	1.0	1.15%	16.6	4.97%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e0	-1.788e-02	1.0000	1.0	1.15%	16.7	5.01%
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer	NGCTAATTAG	1e0	-1.704e-02	1.0000	20.0	22.99%	113.8	34.08%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e0	-1.672e-02	1.0000	13.0	14.94%	83.0	24.85%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	-1.629e-02	1.0000	2.0	2.30%	24.0	7.20%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	-1.629e-02	1.0000	2.0	2.30%	24.6	7.38%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	-1.629e-02	1.0000	2.0	2.30%	24.1	7.21%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	-1.629e-02	1.0000	2.0	2.30%	24.5	7.35%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.452e-02	1.0000	13.0	14.94%	83.1	24.88%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e0	-1.399e-02	1.0000	1.0	1.15%	17.7	5.31%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e0	-1.399e-02	1.0000	1.0	1.15%	17.3	5.19%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e0	-1.399e-02	1.0000	1.0	1.15%	17.1	5.12%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.314e-02	1.0000	2.0	2.30%	25.5	7.65%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.314e-02	1.0000	2.0	2.30%	26.0	7.78%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e0	-1.306e-02	1.0000	6.0	6.90%	49.3	14.78%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e0	-1.234e-02	1.0000	42.0	48.28%	203.2	60.86%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.095e-02	1.0000	1.0	1.15%	18.7	5.59%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.095e-02	1.0000	1.0	1.15%	18.4	5.51%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.095e-02	1.0000	1.0	1.15%	18.4	5.52%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.058e-02	1.0000	2.0	2.30%	27.0	8.07%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e0	-1.058e-02	1.0000	2.0	2.30%	26.2	7.85%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-9.992e-03	1.0000	5.0	5.75%	45.2	13.53%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-9.555e-03	1.0000	19.0	21.84%	113.6	34.02%
HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer	TWVGGTCCGC	1e0	-8.512e-03	1.0000	2.0	2.30%	27.8	8.32%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e0	-7.523e-03	1.0000	9.0	10.34%	68.6	20.55%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-7.066e-03	1.0000	4.0	4.60%	42.0	12.57%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	-6.836e-03	1.0000	2.0	2.30%	28.5	8.55%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-6.693e-03	1.0000	1.0	1.15%	20.8	6.22%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-6.693e-03	1.0000	1.0	1.15%	20.4	6.10%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-6.693e-03	1.0000	1.0	1.15%	20.7	6.20%
RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer	CYAAAAWWGG	1e0	-6.429e-03	1.0000	10.0	11.49%	74.6	22.33%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-6.373e-03	1.0000	17.0	19.54%	107.4	32.16%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e0	-5.993e-03	1.0000	13.0	14.94%	89.8	26.91%
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer	NDATGASTCAYN	1e0	-5.824e-03	1.0000	4.0	4.60%	42.1	12.60%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-5.437e-03	1.0000	3.0	3.45%	36.2	10.84%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-5.230e-03	1.0000	1.0	1.15%	21.3	6.39%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-5.230e-03	1.0000	1.0	1.15%	21.1	6.31%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-5.230e-03	1.0000	1.0	1.15%	21.9	6.55%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e0	-5.230e-03	1.0000	1.0	1.15%	21.6	6.47%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	-5.230e-03	1.0000	1.0	1.15%	21.0	6.29%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e0	-5.230e-03	1.0000	1.0	1.15%	21.3	6.37%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e0	-5.121e-03	1.0000	25.0	28.74%	143.8	43.08%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-4.792e-03	1.0000	4.0	4.60%	43.2	12.94%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-4.590e-03	1.0000	9.0	10.34%	71.9	21.52%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-4.421e-03	1.0000	3.0	3.45%	37.2	11.14%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-4.421e-03	1.0000	3.0	3.45%	37.0	11.09%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	-4.421e-03	1.0000	3.0	3.45%	37.9	11.35%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-4.390e-03	1.0000	2.0	2.30%	30.1	9.01%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-4.084e-03	1.0000	1.0	1.15%	22.1	6.63%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-4.084e-03	1.0000	1.0	1.15%	22.1	6.63%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	-4.084e-03	1.0000	1.0	1.15%	22.4	6.70%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	-4.084e-03	1.0000	1.0	1.15%	22.8	6.84%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-3.935e-03	1.0000	4.0	4.60%	44.6	13.36%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-3.935e-03	1.0000	4.0	4.60%	44.1	13.21%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e0	-3.770e-03	1.0000	18.0	20.69%	115.4	34.55%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e0	-3.511e-03	1.0000	2.0	2.30%	31.6	9.47%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-3.511e-03	1.0000	2.0	2.30%	31.9	9.56%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-3.333e-03	1.0000	10.0	11.49%	78.5	23.51%
Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer	NANTGCSGCA	1e0	-3.188e-03	1.0000	1.0	1.15%	23.5	7.04%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	-3.152e-03	1.0000	6.0	6.90%	57.6	17.24%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e0	-2.993e-03	1.0000	30.0	34.48%	167.6	50.21%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e0	-2.978e-03	1.0000	31.0	35.63%	171.1	51.24%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-2.804e-03	1.0000	2.0	2.30%	32.7	9.79%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e0	-2.745e-03	1.0000	16.0	18.39%	108.4	32.46%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-2.639e-03	1.0000	4.0	4.60%	46.2	13.84%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e0	-2.626e-03	1.0000	8.0	9.20%	69.5	20.83%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-2.487e-03	1.0000	1.0	1.15%	24.4	7.31%
SeqBias: CG-repeat	CGCGCGCGCG	1e0	-2.236e-03	1.0000	2.0	2.30%	33.9	10.14%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e0	-2.131e-03	1.0000	33.0	37.93%	181.6	54.40%
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer	KCACGTGMCN	1e0	-2.024e-03	1.0000	7.0	8.05%	65.3	19.57%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.938e-03	1.0000	1.0	1.15%	25.5	7.65%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e0	-1.938e-03	1.0000	1.0	1.15%	25.8	7.72%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.830e-03	1.0000	5.0	5.75%	54.5	16.32%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e0	-1.792e-03	1.0000	6.0	6.90%	60.1	17.99%
Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer	GATTTGCATA	1e0	-1.510e-03	1.0000	1.0	1.15%	26.4	7.92%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	-1.420e-03	1.0000	12.0	13.79%	93.9	28.14%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	-1.416e-03	1.0000	2.0	2.30%	35.7	10.69%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	-1.416e-03	1.0000	2.0	2.30%	35.9	10.74%
TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer	CCAAAAATRG	1e0	-1.129e-03	1.0000	9.0	10.34%	79.1	23.68%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e0	-1.125e-03	1.0000	2.0	2.30%	36.8	11.03%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-9.930e-04	1.0000	3.0	3.45%	44.5	13.32%
PSE(SNAPc)/K562-mStart-Seq/Homer	WAVTCACCMTAASYDAAAAG	1e0	-9.150e-04	1.0000	1.0	1.15%	28.0	8.40%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	-9.150e-04	1.0000	1.0	1.15%	28.9	8.67%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	-8.920e-04	1.0000	2.0	2.30%	37.1	11.11%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e0	-8.920e-04	1.0000	2.0	2.30%	37.2	11.13%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e0	-8.200e-04	1.0000	5.0	5.75%	58.3	17.47%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e0	-7.640e-04	1.0000	4.0	4.60%	52.1	15.62%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	-7.070e-04	1.0000	2.0	2.30%	38.8	11.63%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e0	-6.450e-04	1.0000	15.0	17.24%	112.7	33.77%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e0	-6.250e-04	1.0000	35.0	40.23%	196.6	58.88%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e0	-5.110e-04	1.0000	3.0	3.45%	47.8	14.33%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-4.990e-04	1.0000	4.0	4.60%	54.4	16.31%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e0	-4.920e-04	1.0000	8.0	9.20%	78.1	23.40%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-4.420e-04	1.0000	2.0	2.30%	40.5	12.12%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e0	-4.420e-04	1.0000	2.0	2.30%	40.7	12.20%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-4.150e-04	1.0000	28.0	32.18%	171.9	51.50%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e0	-4.020e-04	1.0000	4.0	4.60%	55.5	16.61%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-3.490e-04	1.0000	2.0	2.30%	41.7	12.48%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-3.260e-04	1.0000	3.0	3.45%	49.5	14.83%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e0	-3.230e-04	1.0000	4.0	4.60%	56.8	17.01%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-3.000e-04	1.0000	9.0	10.34%	86.5	25.90%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e0	-2.750e-04	1.0000	2.0	2.30%	42.8	12.82%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e0	-2.710e-04	1.0000	14.0	16.09%	112.1	33.58%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e0	-2.600e-04	1.0000	3.0	3.45%	50.6	15.17%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-2.430e-04	1.0000	6.0	6.90%	70.4	21.10%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.170e-04	1.0000	2.0	2.30%	43.3	12.98%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.780e-04	1.0000	18.0	20.69%	133.3	39.91%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	-1.550e-04	1.0000	1.0	1.15%	35.7	10.70%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e0	-1.340e-04	1.0000	2.0	2.30%	45.1	13.51%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e0	-1.280e-04	1.0000	7.0	8.05%	79.8	23.91%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e0	-1.200e-04	1.0000	1.0	1.15%	36.4	10.91%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e0	-1.130e-04	1.0000	38.0	43.68%	216.2	64.75%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.050e-04	1.0000	2.0	2.30%	46.7	13.99%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e0	-1.050e-04	1.0000	2.0	2.30%	46.1	13.82%
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer	VTTACGTAAYNNNNN	1e0	-1.030e-04	1.0000	3.0	3.45%	54.2	16.24%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	-9.200e-05	1.0000	1.0	1.15%	37.5	11.23%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-8.900e-05	1.0000	17.0	19.54%	132.1	39.57%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-8.200e-05	1.0000	2.0	2.30%	47.4	14.19%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e0	-7.900e-05	1.0000	5.0	5.75%	69.8	20.91%
Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer	AGGTGTGAAA	1e0	-6.500e-05	1.0000	3.0	3.45%	56.6	16.96%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	-6.400e-05	1.0000	2.0	2.30%	48.7	14.60%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e0	-6.000e-05	1.0000	17.0	19.54%	135.0	40.43%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e0	-5.100e-05	1.0000	3.0	3.45%	57.2	17.14%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-4.500e-05	1.0000	11.0	12.64%	106.8	31.98%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e0	-4.300e-05	1.0000	6.0	6.90%	78.7	23.57%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e0	-4.200e-05	1.0000	1.0	1.15%	40.3	12.07%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e0	-3.900e-05	1.0000	2.0	2.30%	51.0	15.26%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e0	-3.200e-05	1.0000	3.0	3.45%	59.1	17.70%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e0	-3.100e-05	1.0000	2.0	2.30%	51.2	15.33%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	-2.500e-05	1.0000	1.0	1.15%	42.5	12.74%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e0	-2.200e-05	1.0000	6.0	6.90%	81.8	24.50%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e0	-1.900e-05	1.0000	22.0	25.29%	163.0	48.81%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-1.800e-05	1.0000	6.0	6.90%	83.0	24.85%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e0	-1.200e-05	1.0000	3.0	3.45%	63.1	18.90%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	-9.000e-06	1.0000	6.0	6.90%	85.5	25.60%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e0	-8.000e-06	1.0000	4.0	4.60%	72.1	21.60%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-7.000e-06	1.0000	3.0	3.45%	66.0	19.76%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	-7.000e-06	1.0000	6.0	6.90%	86.7	25.98%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	-7.000e-06	1.0000	2.0	2.30%	57.3	17.17%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-7.000e-06	1.0000	1.0	1.15%	47.2	14.15%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e0	-7.000e-06	1.0000	9.0	10.34%	104.5	31.31%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-5.000e-06	1.0000	12.0	13.79%	121.0	36.25%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	-5.000e-06	1.0000	2.0	2.30%	58.6	17.56%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e0	-5.000e-06	1.0000	2.0	2.30%	58.4	17.48%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	-4.000e-06	1.0000	2.0	2.30%	59.3	17.75%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e0	-4.000e-06	1.0000	4.0	4.60%	75.9	22.74%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	-3.000e-06	1.0000	9.0	10.34%	107.4	32.17%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e0	-3.000e-06	1.0000	2.0	2.30%	60.0	17.99%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e0	-3.000e-06	1.0000	2.0	2.30%	60.2	18.04%
bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer	VNNGGATTADNN	1e0	-3.000e-06	1.0000	8.0	9.20%	102.3	30.65%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e0	-2.000e-06	1.0000	15.0	17.24%	140.7	42.14%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e0	-1.000e-06	1.0000	1.0	1.15%	53.3	15.98%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e0	-1.000e-06	1.0000	4.0	4.60%	80.3	24.06%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e0	-1.000e-06	1.0000	4.0	4.60%	81.6	24.43%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e0	-1.000e-06	1.0000	26.0	29.89%	192.2	57.57%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e0	-1.000e-06	1.0000	6.0	6.90%	95.5	28.61%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-1.000e-06	1.0000	3.0	3.45%	74.4	22.28%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e0	-1.000e-06	1.0000	4.0	4.60%	82.8	24.79%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e0	-1.000e-06	1.0000	4.0	4.60%	82.7	24.77%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e0	-1.000e-06	1.0000	24.0	27.59%	185.2	55.47%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e0	-1.000e-06	1.0000	2.0	2.30%	66.8	20.01%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.000e-06	1.0000	10.0	11.49%	120.1	35.99%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e0	-0.000e+00	1.0000	2.0	2.30%	67.1	20.11%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e0	-0.000e+00	1.0000	37.0	42.53%	235.1	70.41%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e0	-0.000e+00	1.0000	3.0	3.45%	76.9	23.03%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	-0.000e+00	1.0000	5.0	5.75%	91.6	27.45%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e0	-0.000e+00	1.0000	4.0	4.60%	85.8	25.69%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	-0.000e+00	1.0000	2.0	2.30%	70.9	21.23%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e0	-0.000e+00	1.0000	1.0	1.15%	60.5	18.12%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e0	-0.000e+00	1.0000	2.0	2.30%	71.5	21.42%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-0.000e+00	1.0000	2.0	2.30%	72.8	21.79%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	-0.000e+00	1.0000	4.0	4.60%	89.2	26.71%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-0.000e+00	1.0000	5.0	5.75%	97.9	29.31%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e0	-0.000e+00	1.0000	4.0	4.60%	90.3	27.06%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e0	-0.000e+00	1.0000	2.0	2.30%	75.9	22.72%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e0	-0.000e+00	1.0000	13.0	14.94%	146.4	43.84%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	-0.000e+00	1.0000	1.0	1.15%	66.6	19.96%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e0	-0.000e+00	1.0000	1.0	1.15%	66.9	20.04%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e0	-0.000e+00	1.0000	4.0	4.60%	94.4	28.28%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e0	-0.000e+00	1.0000	4.0	4.60%	94.8	28.41%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	-0.000e+00	1.0000	1.0	1.15%	67.4	20.19%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e0	-0.000e+00	1.0000	4.0	4.60%	95.5	28.60%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	-0.000e+00	1.0000	13.0	14.94%	149.9	44.90%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e0	-0.000e+00	1.0000	1.0	1.15%	69.3	20.77%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-0.000e+00	1.0000	9.0	10.34%	129.2	38.71%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-0.000e+00	1.0000	5.0	5.75%	105.7	31.66%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e0	-0.000e+00	1.0000	8.0	9.20%	125.4	37.57%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e0	-0.000e+00	1.0000	2.0	2.30%	84.0	25.17%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-0.000e+00	1.0000	18.0	20.69%	178.2	53.38%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-0.000e+00	1.0000	5.0	5.75%	111.6	33.41%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e0	-0.000e+00	1.0000	1.0	1.15%	78.5	23.52%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e0	-0.000e+00	1.0000	3.0	3.45%	98.1	29.38%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e0	-0.000e+00	1.0000	2.0	2.30%	91.6	27.45%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e0	-0.000e+00	1.0000	4.0	4.60%	109.7	32.87%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e0	-0.000e+00	1.0000	1.0	1.15%	84.2	25.22%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-0.000e+00	1.0000	0.0	0.00%	2.6	0.77%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-0.000e+00	1.0000	0.0	0.00%	3.0	0.89%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-0.000e+00	1.0000	0.0	0.00%	3.0	0.89%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-0.000e+00	1.0000	0.0	0.00%	2.6	0.77%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-0.000e+00	1.0000	0.0	0.00%	2.8	0.85%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-0.000e+00	1.0000	0.0	0.00%	2.6	0.77%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-0.000e+00	1.0000	0.0	0.00%	2.4	0.73%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-0.000e+00	1.0000	0.0	0.00%	2.8	0.84%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.5	0.74%
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer	TGWAAYCTGABACCB	1e0	-0.000e+00	1.0000	0.0	0.00%	2.6	0.79%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.8	0.84%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.8	0.85%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	-0.000e+00	1.0000	0.0	0.00%	2.5	0.75%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.1	0.64%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.8	0.84%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e0	-0.000e+00	1.0000	0.0	0.00%	2.1	0.64%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	-0.000e+00	1.0000	0.0	0.00%	2.0	0.61%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e0	-0.000e+00	1.0000	0.0	0.00%	2.2	0.65%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e0	-0.000e+00	1.0000	0.0	0.00%	2.4	0.72%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-0.000e+00	1.0000	0.0	0.00%	3.5	1.06%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-0.000e+00	1.0000	0.0	0.00%	3.8	1.14%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-0.000e+00	1.0000	0.0	0.00%	3.2	0.94%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-0.000e+00	1.0000	0.0	0.00%	3.5	1.04%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-0.000e+00	1.0000	0.0	0.00%	3.8	1.14%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	-0.000e+00	1.0000	0.0	0.00%	3.8	1.15%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e0	-0.000e+00	1.0000	0.0	0.00%	3.9	1.18%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e0	-0.000e+00	1.0000	0.0	0.00%	3.4	1.02%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e0	-0.000e+00	1.0000	0.0	0.00%	3.1	0.93%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	-0.000e+00	1.0000	0.0	0.00%	3.9	1.16%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e0	-0.000e+00	1.0000	0.0	0.00%	3.3	0.98%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	0.8	0.25%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.08%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer	BCWGATTCAATCAAN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.8	0.25%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	0.000e+00	1.0000	0.0	0.00%	0.1	0.04%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.13%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.06%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.09%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.21%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.13%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.12%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.12%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.11%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.26%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.08%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.27%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.10%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.26%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.09%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer	GCACAYAGTAGGKCY	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	0.5	0.16%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.08%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.6	0.18%
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer	RHHCAGAGAGGB	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
SeqBias: polyA-repeat	AAAAAAAAAA	1e0	0.000e+00	1.0000	87.0	100.00%	333.9	100.00%
SeqBias: C/A-bias	MMMMMMMMMM	1e0	0.000e+00	1.0000	87.0	100.00%	333.9	100.00%
SeqBias: polyC-repeat	CCCCCCCCCC	1e0	0.000e+00	1.0000	87.0	100.00%	333.9	100.00%
SeqBias: G/A bias	RRRRRRRRRR	1e0	0.000e+00	1.0000	87.0	100.00%	333.1	99.76%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e0	0.000e+00	1.0000	87.0	100.00%	333.9	100.00%
 Ik-1	NHTTGGGAATRCC	1e0	0.000e+00	1.0000	87.0	100.00%	333.9	100.00%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.21%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.13%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	0.000e+00	1.0000	0.0	0.00%	0.3	0.09%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.05%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e0	0.000e+00	1.0000	0.0	0.00%	0.6	0.18%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	0.000e+00	1.0000	0.0	0.00%	0.5	0.14%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.13%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e0	0.000e+00	1.0000	0.0	0.00%	0.7	0.21%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	0.000e+00	1.0000	0.0	0.00%	1.4	0.42%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.32%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	1.8	0.54%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.48%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	0.000e+00	1.0000	0.0	0.00%	1.4	0.43%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	1.8	0.54%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	1.5	0.45%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.49%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	1.7	0.52%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e0	0.000e+00	1.0000	0.0	0.00%	1.3	0.38%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.49%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.47%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	1.3	0.38%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.33%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e0	0.000e+00	1.0000	0.0	0.00%	1.6	0.47%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	1.4	0.41%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e0	0.000e+00	1.0000	0.0	0.00%	1.0	0.31%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.33%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.32%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	0.000e+00	1.0000	0.0	0.00%	1.2	0.37%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.34%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	4.4	1.32%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	0.000e+00	1.0000	0.0	0.00%	4.6	1.36%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	0.000e+00	1.0000	0.0	0.00%	4.1	1.24%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	0.000e+00	1.0000	0.0	0.00%	4.0	1.20%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	5.4	1.61%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	5.4	1.62%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	5.1	1.52%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	5.9	1.76%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	6.0	1.79%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	6.0	1.79%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	5.3	1.60%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	0.000e+00	1.0000	0.0	0.00%	5.5	1.64%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	0.000e+00	1.0000	0.0	0.00%	6.0	1.78%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	0.000e+00	1.0000	0.0	0.00%	5.3	1.59%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	5.9	1.77%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	5.2	1.57%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	0.000e+00	1.0000	0.0	0.00%	5.4	1.62%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	0.000e+00	1.0000	0.0	0.00%	5.3	1.57%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e0	0.000e+00	1.0000	0.0	0.00%	5.5	1.64%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	6.0	1.80%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e0	0.000e+00	1.0000	0.0	0.00%	5.3	1.58%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	5.7	1.71%
Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer	TAAYCYAATCAA	1e0	0.000e+00	1.0000	0.0	0.00%	6.4	1.91%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	0.000e+00	1.0000	0.0	0.00%	6.2	1.86%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	0.000e+00	1.0000	0.0	0.00%	6.3	1.89%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	0.000e+00	1.0000	0.0	0.00%	6.6	1.97%
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer	WAABTAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	6.0	1.81%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	0.000e+00	1.0000	0.0	0.00%	6.8	2.05%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	0.000e+00	1.0000	0.0	0.00%	6.7	2.00%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	6.2	1.87%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e0	0.000e+00	1.0000	0.0	0.00%	6.2	1.85%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	0.000e+00	1.0000	0.0	0.00%	7.4	2.21%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	7.8	2.34%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	0.000e+00	1.0000	0.0	0.00%	7.3	2.18%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	0.000e+00	1.0000	0.0	0.00%	8.0	2.39%
NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer	AWWWTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	7.2	2.15%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	7.1	2.14%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	0.000e+00	1.0000	0.0	0.00%	7.3	2.20%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	0.000e+00	1.0000	0.0	0.00%	7.9	2.36%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	8.0	2.39%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	0.000e+00	1.0000	0.0	0.00%	7.2	2.16%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	0.000e+00	1.0000	0.0	0.00%	7.5	2.24%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	0.000e+00	1.0000	0.0	0.00%	7.1	2.13%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e0	0.000e+00	1.0000	0.0	0.00%	7.8	2.35%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	8.0	2.40%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	0.000e+00	1.0000	0.0	0.00%	8.9	2.66%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	0.000e+00	1.0000	0.0	0.00%	8.9	2.66%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	0.000e+00	1.0000	0.0	0.00%	8.2	2.46%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	0.000e+00	1.0000	0.0	0.00%	8.6	2.57%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e0	0.000e+00	1.0000	0.0	0.00%	8.6	2.58%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	0.000e+00	1.0000	0.0	0.00%	8.3	2.50%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e0	0.000e+00	1.0000	0.0	0.00%	8.0	2.40%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	0.000e+00	1.0000	0.0	0.00%	8.1	2.43%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	0.000e+00	1.0000	0.0	0.00%	9.0	2.70%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	0.000e+00	1.0000	0.0	0.00%	9.6	2.87%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	9.1	2.72%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	9.1	2.72%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	0.000e+00	1.0000	0.0	0.00%	9.9	2.97%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	0.000e+00	1.0000	0.0	0.00%	9.8	2.95%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e0	0.000e+00	1.0000	0.0	0.00%	9.1	2.74%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e0	0.000e+00	1.0000	0.0	0.00%	9.8	2.93%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	0.000e+00	1.0000	0.0	0.00%	10.2	3.05%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	0.000e+00	1.0000	0.0	0.00%	10.0	3.01%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e0	0.000e+00	1.0000	0.0	0.00%	10.4	3.11%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e0	0.000e+00	1.0000	0.0	0.00%	10.2	3.05%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	0.000e+00	1.0000	0.0	0.00%	10.2	3.05%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e0	0.000e+00	1.0000	0.0	0.00%	10.0	3.00%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	0.000e+00	1.0000	0.0	0.00%	10.1	3.02%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	10.0	3.01%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	10.0	3.00%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	0.000e+00	1.0000	0.0	0.00%	10.9	3.26%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e0	0.000e+00	1.0000	0.0	0.00%	10.7	3.19%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	11.5	3.45%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	0.000e+00	1.0000	0.0	0.00%	11.2	3.36%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	0.000e+00	1.0000	0.0	0.00%	11.6	3.47%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e0	0.000e+00	1.0000	0.0	0.00%	11.3	3.40%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e0	0.000e+00	1.0000	0.0	0.00%	11.2	3.34%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	0.000e+00	1.0000	1.0	1.15%	90.4	27.08%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	0.000e+00	1.0000	0.0	0.00%	12.9	3.88%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	12.5	3.73%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	0.000e+00	1.0000	0.0	0.00%	13.9	4.17%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	0.000e+00	1.0000	0.0	0.00%	13.9	4.16%
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer	VVRRAACAATGG	1e0	0.000e+00	1.0000	0.0	0.00%	13.2	3.96%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	0.000e+00	1.0000	0.0	0.00%	13.2	3.97%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e0	0.000e+00	1.0000	0.0	0.00%	14.4	4.31%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e0	0.000e+00	1.0000	0.0	0.00%	14.7	4.42%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	0.000e+00	1.0000	0.0	0.00%	15.5	4.64%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	0.000e+00	1.0000	0.0	0.00%	15.9	4.77%
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer	TTCAAAWTAAAAGTC	1e0	0.000e+00	1.0000	0.0	0.00%	15.5	4.63%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	0.000e+00	1.0000	0.0	0.00%	15.7	4.69%
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer	AAWCTAGGTCARDNN	1e0	0.000e+00	1.0000	0.0	0.00%	16.3	4.89%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	0.000e+00	1.0000	0.0	0.00%	16.6	4.99%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e0	0.000e+00	1.0000	0.0	0.00%	16.1	4.83%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e0	0.000e+00	1.0000	0.0	0.00%	16.3	4.90%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	0.000e+00	1.0000	0.0	0.00%	16.5	4.95%
Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer	TTAATTNAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	17.5	5.23%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	0.000e+00	1.0000	0.0	0.00%	17.0	5.10%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e0	0.000e+00	1.0000	0.0	0.00%	17.0	5.09%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e0	0.000e+00	1.0000	0.0	0.00%	18.0	5.39%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e0	0.000e+00	1.0000	0.0	0.00%	17.5	5.24%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	0.000e+00	1.0000	0.0	0.00%	18.2	5.46%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e0	0.000e+00	1.0000	0.0	0.00%	18.0	5.40%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	18.9	5.66%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	19.4	5.81%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e0	0.000e+00	1.0000	0.0	0.00%	19.2	5.76%
EIL4(EIL)/Tomato-EIL4-ChIP-Seq(GSE116581)/Homer	GATTCAWTGAAT	1e0	0.000e+00	1.0000	0.0	0.00%	19.4	5.82%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e0	0.000e+00	1.0000	0.0	0.00%	20.8	6.23%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e0	0.000e+00	1.0000	0.0	0.00%	20.4	6.11%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e0	0.000e+00	1.0000	0.0	0.00%	21.0	6.28%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	20.7	6.21%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	0.000e+00	1.0000	0.0	0.00%	21.1	6.32%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e0	0.000e+00	1.0000	0.0	0.00%	21.5	6.45%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	0.000e+00	1.0000	0.0	0.00%	22.7	6.79%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	0.000e+00	1.0000	0.0	0.00%	22.8	6.82%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	0.000e+00	1.0000	0.0	0.00%	22.8	6.83%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	0.000e+00	1.0000	0.0	0.00%	22.1	6.62%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e0	0.000e+00	1.0000	0.0	0.00%	22.9	6.85%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	0.000e+00	1.0000	11.0	12.64%	178.9	53.58%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	0.000e+00	1.0000	0.0	0.00%	23.5	7.05%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	0.000e+00	1.0000	0.0	0.00%	23.4	7.00%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e0	0.000e+00	1.0000	0.0	0.00%	23.4	7.00%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e0	0.000e+00	1.0000	8.0	9.20%	164.7	49.32%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	24.7	7.39%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e0	0.000e+00	1.0000	0.0	0.00%	24.5	7.35%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e0	0.000e+00	1.0000	0.0	0.00%	24.9	7.47%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	0.000e+00	1.0000	0.0	0.00%	24.9	7.46%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e0	0.000e+00	1.0000	18.0	20.69%	239.4	71.71%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	0.000e+00	1.0000	6.0	6.90%	140.8	42.16%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	0.000e+00	1.0000	0.0	0.00%	25.7	7.71%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e0	0.000e+00	1.0000	0.0	0.00%	25.8	7.73%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	0.000e+00	1.0000	0.0	0.00%	25.1	7.53%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	0.000e+00	1.0000	15.0	17.24%	253.3	75.86%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	0.000e+00	1.0000	0.0	0.00%	26.7	7.99%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	0.000e+00	1.0000	0.0	0.00%	27.0	8.09%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	28.1	8.41%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	0.000e+00	1.0000	0.0	0.00%	28.3	8.47%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	0.000e+00	1.0000	0.0	0.00%	28.3	8.47%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	0.000e+00	1.0000	0.0	0.00%	28.9	8.67%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e0	0.000e+00	1.0000	1.0	1.15%	134.2	40.18%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	0.000e+00	1.0000	0.0	0.00%	29.3	8.77%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e0	0.000e+00	1.0000	0.0	0.00%	29.5	8.84%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e0	0.000e+00	1.0000	0.0	0.00%	29.9	8.95%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e0	0.000e+00	1.0000	0.0	0.00%	29.1	8.71%
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer	VVATGACGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	30.3	9.09%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	0.000e+00	1.0000	0.0	0.00%	30.5	9.13%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	30.3	9.09%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	30.6	9.16%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e0	0.000e+00	1.0000	0.0	0.00%	30.2	9.04%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e0	0.000e+00	1.0000	0.0	0.00%	30.9	9.24%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	31.1	9.31%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e0	0.000e+00	1.0000	0.0	0.00%	31.3	9.37%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e0	0.000e+00	1.0000	0.0	0.00%	32.9	9.87%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	0.000e+00	1.0000	0.0	0.00%	34.7	10.40%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	0.000e+00	1.0000	0.0	0.00%	34.3	10.27%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e0	0.000e+00	1.0000	0.0	0.00%	34.2	10.24%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	0.000e+00	1.0000	0.0	0.00%	37.7	11.30%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e0	0.000e+00	1.0000	0.0	0.00%	37.9	11.36%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e0	0.000e+00	1.0000	0.0	0.00%	37.7	11.30%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e0	0.000e+00	1.0000	1.0	1.15%	105.5	31.59%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e0	0.000e+00	1.0000	0.0	0.00%	41.5	12.42%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e0	0.000e+00	1.0000	0.0	0.00%	42.1	12.61%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	0.000e+00	1.0000	0.0	0.00%	44.8	13.40%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e0	0.000e+00	1.0000	0.0	0.00%	45.5	13.64%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e0	0.000e+00	1.0000	0.0	0.00%	46.3	13.87%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e0	0.000e+00	1.0000	0.0	0.00%	57.2	17.14%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	0.000e+00	1.0000	0.0	0.00%	77.0	23.06%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e0	0.000e+00	1.0000	0.0	0.00%	58.3	17.47%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	58.9	17.63%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e0	0.000e+00	1.0000	0.0	0.00%	65.1	19.50%