Information for 1-CTGAGKRCAGTC (Motif 1)

A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A C T G A G T C G T A C A G T C A C G T A G T C C G T A A C T G
p-value:1e-26
log p-value:-6.039e+01
Information Content per bp:1.931
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif63.22%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif7.71%
Average Position of motif in Targets139.4 +/- 3.8bp
Average Position of motif in Background4017750.1 +/- 3488182.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGAGKRCAGTC
-TRAGGTCA---
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGAGKRCAGTC
CAAAGGTCAG--
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

z/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGAGKRCAGTC
-TGAGTG-----
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A C G T A G C T A C T G C G T A A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGKRCAGTC
GCCTCAGGGCAT--
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGKRCAGTC
NNGCCTGAGGCANN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T A C G T

ZBTB32/MA1580.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTGAGKRCAGTC-
---TGTACAGTAT
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C A C G T
A C G T A C G T A C G T G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

z/dmmpmm(Down)/fly

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGAGKRCAGTC
-TGAGTG-----
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A C G T G C A T A C T G C G T A T C A G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGAGKRCAGTC
-TNNGGGCAG--
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGAGKRCAGTC
--GGGTGCANT-
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
A C G T A C G T C T A G A C T G A C T G A G C T C T A G G A T C C T G A C T A G G C A T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGAGKRCAGTC
GTGAGTGNAC--
 A G T C A C G T A C T G C G T A A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T