Information for 13-GGCCGAAAGAAT (Motif 12)

A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T
Reverse Opposite:
C T G A A G C T A C G T A G T C A G C T A C G T A C G T A G T C C T A G A C T G A G T C A G T C
p-value:1e-12
log p-value:-2.926e+01
Information Content per bp:1.905
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif62.07%
Number of Background Sequences with motif69.6
Percentage of Background Sequences with motif20.37%
Average Position of motif in Targets12.8 +/- 0.9bp
Average Position of motif in Background4001759.7 +/- 4109906.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT2G40260/MA1385.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGCCGAAAGAAT-------
----AAAAGAATATTTTAA
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A T C G A A C T G C G T A C G T A C G A T C T G A G C A T C G A T G C A T C G A T C G T A C G T A

AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGCCGAAAGAAT-----
-----AAAGAATRTTTW
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T C G A A C T G C G T A C G T A A G C T C T A G C G A T C G A T G C A T G C A T

PDR1/PDR1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAAAGAAT
CCGCCGAATAA--
 A C G T A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T
T G A C A T G C C A T G A T G C A G T C C T A G C T G A T G C A C G A T T C G A C G T A A C G T A C G T

PDR1(MacIsaac)/Yeast

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAAAGAAT
CCGCCGAATAA--
 A C G T A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T
T G A C A T G C C A T G A T G C A G T C C T A G C T G A T G C A C G A T T C G A C G T A A C G T A C G T

Sf3b4(RRM)/Danio_rerio-RNCMPT00224-PBM/HughesRNA

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCCGAAAGAAT
--NCAAAAG---
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T
A C G T A C G T C A G T A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T

AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGCCGAAAGAAT---
-----ADRGAATGTT
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A A C T G C G T A C G T A A C G T C T A G C G A T C G A T

KAN2/MA1383.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGCCGAAAGAAT--------
-----AAAGAATATTCTAAN
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C A T G C G T A C G T A A C G T C G T A C G A T C G A T G T A C A G C T C G T A C G T A C G A T

AZF1/MA0277.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCCGAAAGAAT
---AAAAAGAAA
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T
A C G T A C G T A C G T C G T A C G T A C G T A G T C A C T G A A C T G G T C A C G T A C G T A

KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GGCCGAAAGAAT--
------RAGAATAT
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A C T G G T C A C G T A A C G T C T G A G C A T

MNB1A/MA0053.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGCCGAAAGAAT
-----AAAGC--
 A C T G C T A G A G T C G A T C C T A G C G T A C G T A C T G A A C T G C G T A C T G A A G C T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G G A T C A C G T A C G T