Information for 14-TGTTGGCAAACT (Motif 13)

A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C C T G A
p-value:1e-12
log p-value:-2.859e+01
Information Content per bp:1.941
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif56.32%
Number of Background Sequences with motif56.1
Percentage of Background Sequences with motif16.43%
Average Position of motif in Targets96.4 +/- 8.4bp
Average Position of motif in Background4087223.5 +/- 4709042.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGTTGGCAAACT
-GGTGGCAAA--
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
A C G T C T A G T A C G G A C T C T A G C T A G G T A C C T G A C G T A T G C A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGTTGGCAAACT
NNTTGGCANN--
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

slbo/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGTTGGCAAACT
TGATGGCAAA--
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
C G A T T C A G C G T A A C G T A C G T T C A G G T A C C T G A G T C A G C T A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGTTGGCAAACT
-CTTGGCAA---
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTTGGCAAACT
-NTTGGCANN--
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTTGGCAAACT
GGTTGGCAT---
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

RPN4(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTTGGCAAACT
CGGTGGCAAAA-
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
T A G C C T A G A T C G A G C T C T A G A T C G G T A C C T G A C G T A T G C A G C T A A C G T

AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTTGGCAAACT
TGTCGGCA----
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
G A C T A C T G C G A T A G T C A C T G C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTTGGCAAACT
TGTCGGCA----
 A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
G A C T A C T G C G A T A G T C A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T

ERF027/MA1227.2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGGCAAACT
NNNNTGTCGGCAANN-
 A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T A C T G A C T G G T A C C G T A C G T A T C G A A G T C A C G T
C G T A G C A T C G A T C G A T G A C T C A T G C G A T A G T C C A T G C T A G G A T C C T G A C T G A G C T A C G T A A C G T