Information for 15-TGCGATAAATCG (Motif 14)

A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
Reverse Opposite:
A G T C A C T G C G T A A C G T A C G T A C G T C G T A A C G T A G T C C T A G A G T C C G T A
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.959
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif37.93%
Number of Background Sequences with motif28.1
Percentage of Background Sequences with motif8.23%
Average Position of motif in Targets227.8 +/- 10.5bp
Average Position of motif in Background4811119.4 +/- 3670831.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGCGATAAATCG
GGCCATAAATCA
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

CDX1/MA0878.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCGATAAATCG
GGCCATAAAAC-
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCGATAAATCG---
NNCCATAAATCATNN
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCGATAAATCG
GGCCATAAATCA
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

CDX4/MA1473.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCGATAAATCG
GGCAATAAAAC-
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C A C G T

abd-A/dmmpmm(Down)/fly

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGCGATAAATCG
----ATAAAT--
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
A C G T A C G T A C G T A C G T C G T A G C A T G T C A G C T A G C T A G C A T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCGATAAATCG--
-GTCATAAATCATT
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G A C G T A C G T
A C G T T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

CHA4(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCGATAAATCG
TGCGATGAG---
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
G C A T T C A G G T A C C T A G C T G A A G C T T A C G G T C A C T A G A C G T A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCGATAAATCG
AAGCAATAAAAA-
 A C G T A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A A C G T

DAL80/Literature(Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGCGATAAATCG
---GATAA----
 A C G T A C T G A G T C A C T G C G T A A C G T G T C A C G T A C G T A A C G T A G T C C T A G
A C G T A C G T A C G T A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T