Information for 3-CAACTCAGTA (Motif 15)

A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.152e+01
Information Content per bp:1.530
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif62.07%
Number of Background Sequences with motif88.8
Percentage of Background Sequences with motif26.01%
Average Position of motif in Targets35.2 +/- 2.5bp
Average Position of motif in Background3736804.8 +/- 3914576.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAACTCAGTA-----
NNNACCTCATTATCNTN
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAACTCAGTA-
-AGCTCATTAT
 A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A A C G T
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Initiator/Drosophila-Promoters/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAACTCAGTA-
---NTCAGTYG
 A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T G C A T A C G T A T G C C T G A C T A G G A C T G A T C A C T G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAACTCAGTA-----
GCAACCTCATTATNNNN
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAACTCAGTA-
-NNCTCATTAT
 A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A A C G T
A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

CG2931(RRM)/Drosophila_melanogaster-RNCMPT00147-PBM/HughesRNA

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAACTCAGTA
-AACTAAG--
 A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A
A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAACTCAGTA---
AATCAATTCAATAATT
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

EXC-7(RRM)/Caenorhabditis_elegans-RNCMPT00014-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAACTCAGTA
-AACTTAA--
 A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A
A C G T C G T A C G T A G T A C G A C T G A C T C G T A C T G A A C G T A C G T

RBM42(RRM)/Homo_sapiens-RNCMPT00151-PBM/HughesRNA

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAACTCAGTA
-AACTAAG--
 A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A
A C G T C G T A C G T A A G T C A C G T C G T A G T C A A C T G A C G T A C G T

z/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAACTCAGTA
-CACTCA---
 A G T C C G T A C G T A A G T C A C G T A G T C C G T A A C T G A C G T C G T A
A C G T T A G C C T G A A G T C A C G T A G T C T C G A A C G T A C G T A C G T