Information for 17-AACTGCGTCTGC (Motif 17)

C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C T G C G T A G A T C C T A G A G T C C G T A C T A G A G C T A C G T
p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.918
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif36.78%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif8.64%
Average Position of motif in Targets111.6 +/- 10.3bp
Average Position of motif in Background4199096.6 +/- 4522485.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Med/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AACTGCGTCTGC
-ACTGCGCCTG-
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
A C G T C T A G G A T C A C G T A C T G A T G C A T C G T A G C A T C G A G C T A T C G A C G T

Med/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AACTGCGTCTGC
-ACGGCGCCTGC
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
A C G T C T G A G A T C A C G T A C T G A T G C A T C G A T C G T A G C A C G T A C T G A T G C

grh/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACTGCGTCTGC--
CNAACCGGTCCTGCGG
 A C G T A C G T C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C A C G T A C G T
A G C T A C G T C G T A C G T A A G T C A G C T A C T G A C T G A C G T A G C T A G C T A C G T A C T G A G T C A C T G A C T G

Tal1

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AACTGCGTCTGC
-----CATCTG-
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C G T

HAND2/MA1638.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AACTGCGTCTGC-
---NNCATCTGNN
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C A C G T
A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AACTGCGTCTGC
--VBSYGTCTGG
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

OSR2/MA1646.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACTGCGTCTGC--
--NNGCTTCTGTNN
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C A C G T A C G T
A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

CG14718(RRM)/Drosophila_melanogaster-RNCMPT00006-PBM/HughesRNA

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AACTGCGTCTGC
----NCATCTGG
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
A C G T A C G T A C G T A C G T A T C G T A G C G T C A A C G T A G T C A C G T A C T G A C T G

FHL1/MA0295.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACTGCGTCTGC
-TTTGCGTC---
 C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
A C G T A C G T A C G T C G A T A C T G A G T C A C T G A C G T A T G C A C G T A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACTGCGTCTGC
ACCAACTGTC-----
 A C G T A C G T A C G T C G T A C T G A A G T C A C G T C T A G A G T C C T A G C G A T A G T C A C G T C T A G A G T C
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T A C G T A C G T A C G T A C G T