Information for 21-AGCAAGGAGCCC (Motif 21)

C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G C T A G A G T C A C G T A G T C G T A C A G C T A C G T A T C G A G T C A C G T
p-value:1e-4
log p-value:-1.141e+01
Information Content per bp:1.919
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif51.72%
Number of Background Sequences with motif91.3
Percentage of Background Sequences with motif26.74%
Average Position of motif in Targets318.4 +/- 51.4bp
Average Position of motif in Background3090291.5 +/- 3792125.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM5(RRM)/Homo_sapiens-RNCMPT00154-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCAAGGAGCCC
--GAAGGAG---
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A T C G C G T A T C G A A T C G A T C G C T G A C T A G A C G T A C G T A C G T

ttk/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCAAGGAGCCC
-GCCAGGACC--
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
A C G T T A C G A T C G T G A C C T G A A C T G A C T G C G T A A G T C G T A C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGCAAGGAGCCC
----CGGAGC--
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

ttk/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCAAGGAGCCC-
-GCCAGGACCTCG
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C A C G T
A C G T T C A G A T G C G T A C C T G A A C T G A C T G C G T A A G T C G T A C G A C T A G C T A C T G

PLAGL2/MA1548.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGCAAGGAGCCC-
---NGGGGGCCCN
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A

SRSF9(RRM)/Homo_sapiens-RNCMPT00074-PBM/HughesRNA

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGCAAGGAGCCC
----AGGAGCA-
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T C G T A C A T G C T A G C G T A T A C G G T A C C T G A A C G T

sna/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCAAGGAGCCC
ANCAGGTGG---
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
G T C A C T A G A G T C C T G A C T A G A C T G A C G T C A T G T C A G A C G T A C G T A C G T

CTCFL/MA1102.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCAAGGAGCCC
AGCAGGGGGCGC
 C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGGAGCCC
GGAGAAAGGTGCGA
 A C G T A C G T C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCAAGGAGCCC
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C C G T A C T G A A C T G C T A G C G T A A C T G A G T C A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T