Information for 24-ATCAATAGGGAG (Motif 23)

C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A G T C A C G T C T G A A C G T A C G T A C T G C G T A A C G T
p-value:1e-2
log p-value:-6.328e+00
Information Content per bp:1.979
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif19.54%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif7.77%
Average Position of motif in Targets265.7 +/- 12.7bp
Average Position of motif in Background3835623.4 +/- 4086682.1bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNRNPA2B1(RRM)/Homo_sapiens-RNCMPT00024-PBM/HughesRNA

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:ATCAATAGGGAG
----NTAGGGA-
 C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATCAATAGGGAG
RRTCAATA-----
 A C G T C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T

HNRNPA1(RRM)/Homo_sapiens-RNCMPT00022-PBM/HughesRNA

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ATCAATAGGGAG
----NTAGGGA-
 C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATCAATAGGGAG
DGATCRATAN----
 A C G T A C G T C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATCAATAGGGAG
HNRAATCAAT------
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATCAATAGGGAG
AAAAAATCAATAAATA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A A C G T

HNRNPA1L2(RRM)/Homo_sapiens-RNCMPT00023-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATCAATAGGGAG
----TTAGGGA-
 C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCAATAGGGAG
GAACAATGG----
 A C G T C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCAATAGGGAG
TAATCGATAA----
 A C G T A C G T C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCAATAGGGAG
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A G C T C G T A A C T G A C T G A C T G C G T A A C T G
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A