Information for 2-AGTATACC (Motif 25)

C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C G T C G T A A G T C A C G T
p-value:1e0
log p-value:-2.503e-01
Information Content per bp:1.530
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif56.32%
Number of Background Sequences with motif205.5
Percentage of Background Sequences with motif60.17%
Average Position of motif in Targets40.0 +/- 2.8bp
Average Position of motif in Background3907727.3 +/- 4295839.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0219(RRM)/Trypanosoma_brucei-RNCMPT00219-PBM/HughesRNA

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AGTATACC
NAGTATAT-
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C
A G C T G C T A A C T G A C G T C G T A A C G T C G T A C G A T A C G T

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGTATACC
GAGTATAA-
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C
C T A G G A C T A C T G A C G T C G T A A C G T C G T A C G T A A C G T

CG11360(KH)/Drosophila_melanogaster-RNCMPT00129-PBM/HughesRNA

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGTATACC
AGAGTATA--
 A C G T A C G T C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C
C G T A A C T G C G T A C T A G C G A T C G T A G C A T C T G A A C G T A C G T

TUT1(RRM,Znf)/Homo_sapiens-RNCMPT00075-PBM/HughesRNA

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTATACC
AGTATCG-
 C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C
C G T A C T A G A C G T C G T A A C G T A G T C A C T G A C G T

AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTATACC----
GGTGCACCDWAA
 C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C A T G T C A G G C A T T C A G A G T C C G T A A G T C T A G C C G A T G C A T G T C A C G T A

Unknown4/Drosophila-Promoters/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTATACC---
AAAAATACCRMA
 A C G T C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T
C T G A C G T A C G T A G C T A C T G A A C G T G T C A A G T C A G T C C T G A G T C A G C T A

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTATACC
-ATATATA
 C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C
A C G T G T C A A G C T C G T A A C G T C G T A A C G T G T C A

At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTATACC
AGTARAAW
 C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C
C G T A A C T G A C G T C T G A C T G A T C G A T G C A C G T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTATACC---
-RCATTCCWGG
 C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTATACC----
--AAAACCRGWW
 C G T A A C T G A C G T C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A A G T C A G T C C T A G A T C G C G A T G C T A