Information for 22-GTGAACCT (Motif 29)

A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T C G A T A G T C C G T A A G T C
p-value:1e0
log p-value:0.000e+00
Information Content per bp:1.961
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif43.68%
Number of Background Sequences with motif282.5
Percentage of Background Sequences with motif82.68%
Average Position of motif in Targets209.9 +/- 6.0bp
Average Position of motif in Background3628476.1 +/- 4169940.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTGAACCT-
-TGAACTCA
 A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

TEIL(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GTGAACCT
ATGTACCT
 A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
T C G A G A C T A T C G G C A T C T G A A G T C A T G C A G C T

AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTGAACCT---
GGTGCACCDWAA
 A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C A T G T C A G G C A T T C A G A G T C C G T A A G T C T A G C C G A T G C A T G T C A C G T A

TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTGAACCT-------
GTGGDCCYNNNNNNN
 A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G A C G T A C T G A C T G C A G T A G T C A G T C A G C T C G T A T A C G G A C T A G C T A G C T T A G C C G T A

Tb_0251(RRM)/Trypanosoma_brucei-RNCMPT00251-PBM/HughesRNA

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTGAACCT
TGTGAAT--
 A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A G C T A C T G A C G T A C T G C G T A C G T A C G A T A C G T A C G T

OPI1/MA0349.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTGAACCT
-CGAACCG
 A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T A T G C A C T G G T C A C G T A A G T C A G T C T C A G

Lm_0223(RRM)/Leishmania_major-RNCMPT00223-PBM/HughesRNA

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTGAACCT
CGTGTAA--
 A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A G T C A C T G A C G T A C T G C G A T C G T A G T C A A C G T A C G T

Pp_0206(RRM)/Physcomitrella_patens-RNCMPT00206-PBM/HughesRNA

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGAACCT--
--NAACCTTT
 A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C T G A C G T A G T A C G T A C A C G T C G A T C A G T

OPI1(MacIsaac)/Yeast

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTGAACCT
-CGAACCG
 A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T A T G C A C T G G T C A C G T A G A T C G T A C T C A G

NR1I3/MA1534.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGAACCT-
ATGAACTTT
 A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T