Information for 3-TGTAGAAGCTCA (Motif 3)

A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A C T G A G T C A C G T A C G T A G T C A G C T C T G A G A T C C G T A
p-value:1e-19
log p-value:-4.476e+01
Information Content per bp:1.945
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif67.82%
Number of Background Sequences with motif55.3
Percentage of Background Sequences with motif16.19%
Average Position of motif in Targets288.8 +/- 50.1bp
Average Position of motif in Background3934838.5 +/- 4048231.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTAGAAGCTCA--
TTCTAGAAGMTTHTW
 A C G T A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A A C G T A C G T
G C A T A C G T A G T C A G C T C T G A A C T G C G T A C G T A T A C G T G A C G C A T G C A T G A T C G C A T C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGTAGAAGCTCA
---NGAAGC---
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTAGAAGCTCA-
CTTCTAGAAGMTTYW
 A C G T A C G T A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A A C G T
A T G C G C A T C G A T G A T C A G C T C T G A A C T G C G T A C G T A T C A G T G A C C G A T G C A T G A T C C G A T

GCR1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGTAGAAGCTCA
-GAGGAAGCC--
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
A C G T A C T G C G A T A C T G A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C G T

GCR1/MA0304.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGTAGAAGCTCA
--TGGAAGCC--
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
A C G T A C G T C G A T A T C G A T C G C G T A G C T A A C T G G T A C A G T C A C G T A C G T

Foxn1/MA1684.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGTAGAAGCTCA
---GGACGC---
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
A C G T A C G T A C G T C T A G A C T G C G T A G T A C A C T G A G T C A C G T A C G T A C G T

GCR2(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTAGAAGCTCA
--NGGAAGC---
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
A C G T A C G T C G T A T A C G C T A G C G T A G C T A A C T G A T G C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGTAGAAGCTCA-
-----AAGGTCAC
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

HSFB2A/MA1665.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTAGAAGCTCA
TCTAGAAGCTTC
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
G C A T G A T C G A C T T C G A C T A G G C T A C G T A A T C G G T A C G C A T G C A T G A T C

GCR1(MacIsaac)/Yeast

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTAGAAGCTCA
--TGGAAGCCC-
 A C G T C T A G A G C T C T G A C T A G C G T A C G T A C T A G A G T C A C G T A T G C C G T A
A C G T A C G T C G A T A C T G C T A G C G T A C G T A A C T G G A T C T G A C T A G C A C G T