Information for 4-GGAGGCTATATG (Motif 4)

T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
Reverse Opposite:
G T A C C G T A G A C T C T G A A G C T C T G A T C A G A G T C A T G C A C G T A G T C A T G C
p-value:1e-18
log p-value:-4.279e+01
Information Content per bp:1.924
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif64.37%
Number of Background Sequences with motif50.4
Percentage of Background Sequences with motif14.77%
Average Position of motif in Targets53.5 +/- 2.7bp
Average Position of motif in Background4415074.3 +/- 4298981.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

UME6/MA0412.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGAGGCTATATG
TCGGCGGCTAATT-
 A C G T A C G T T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
C G A T A T G C C T A G A C T G A G T C A C T G A C T G A G T C C G A T C G T A G C T A G C A T C G A T A C G T

MOT2/MA0379.1/Jaspar

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GGAGGCTATATG
------TATAT-
 T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G A T A C G T

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGCTATATG
TCGGCGGCTA----
 A C G T A C G T T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A G C T A T G C T A C G A T C G T A G C C T A G T A C G A G T C C G A T C T G A A C G T A C G T A C G T A C G T

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGAGGCTATATG
-----NTATATA
 T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G A T C G T A A C G T C G T A A C G T C G T A

UME6(MacIsaac)/Yeast

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGCTATATG
TCGGCGGCTA----
 A C G T A C G T T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A G C T A T G C T C A G A T C G A T G C A T C G A T C G A G T C C G A T C T G A A C G T A C G T A C G T A C G T

ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGAGGCTATATG
GGCGGCTR----
 T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A C T G A C T G A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGAGGCTATATG
----TATATAT-
 T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T G C A A C G T C G T A A C G T C T G A A C G T A C G T

LIN28A(CSD)/Homo_sapiens-RNCMPT00162-PBM/HughesRNA

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCTATATG
CGGAGGA------
 A C G T T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A G T C A T C G T A C G G T C A A T C G A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAGGCTATATG
GGCGGCTG----
 T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A C T G C T A G A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T

CRZ1(MacIsaac)/Yeast

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAGGCTATATG
-GAGGCTG----
 T A C G C T A G C G T A T A C G A C T G A G T C A G C T T C G A A G C T C T G A A C G T A C T G
A C G T A C T G C G A T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T