Information for 5-TTGCTCACTAGA (Motif 5)

A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T T G C A A T C G A C G T A T C G C G T A C T A G A T G C C G T A C G T A
p-value:1e-18
log p-value:-4.261e+01
Information Content per bp:1.951
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif58.62%
Number of Background Sequences with motif38.5
Percentage of Background Sequences with motif11.26%
Average Position of motif in Targets310.8 +/- 40.4bp
Average Position of motif in Background4208829.9 +/- 3713720.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAC1/MA0326.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTGCTCACTAGA
TTTGCTCA-----
 A C G T A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
C G A T C A G T A C G T C T A G A G T C A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

MAC1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGCTCACTAGA
TTTGCTC------
 A C G T A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

YAP1(MacIsaac)/Yeast

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGCTCACTAGA
-TGCTGACTAAT
 A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
A C G T A G C T A C T G G T A C A G C T C A T G C G T A G T A C C A G T T C G A C G T A C G A T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGCTCACTAGA-
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGCTCACTAGA
-DKSWCACT---
 A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
A C G T C T G A A C G T A T G C G C A T A G T C C G T A A T G C A C G T A C G T A C G T A C G T

STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGCTCACTAGA
-HNBTCACT---
 A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
A C G T G A T C G C T A A G C T G C A T A G T C C T G A T A G C G A C T A C G T A C G T A C G T

ABF2/MA0266.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TTGCTCACTAGA
-----CTCTAGA
 A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G T C A C G T C G T A A C T G C G T A

br(var.4)/MA0013.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGCTCACTAGA
TTTGTTTACTA--
 A C G T A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
C G A T C G A T G C A T A C T G A G C T A C G T A G C T C G T A A G T C C G A T C G T A A C G T A C G T

At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGCTCACTAGA
-NHNTCACT---
 A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
A C G T G C T A G A C T A G C T G C A T G A T C T G C A A T G C G A C T A C G T A C G T A C G T

YAP1/YAP1_H2O2Lo/3-YAP1(Harbison)/Yeast

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGCTCACTAGA
--GCTGACTAA-
 A C G T A C G T A T C G A G T C A C G T A T G C C G T A A T G C A C G T C G T A A C T G C G T A
A C G T A C G T A C T G T G A C A C G T A C T G C G T A A G T C G C A T T G C A C G T A A C G T