Information for 8-GGGTCGTGACCA (Motif 8)

C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A G C T A G T C C G T A A G T C C T A G C G T A A G T C A G T C A G T C
p-value:1e-16
log p-value:-3.835e+01
Information Content per bp:1.905
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif68.97%
Number of Background Sequences with motif69.8
Percentage of Background Sequences with motif20.43%
Average Position of motif in Targets26.4 +/- 2.3bp
Average Position of motif in Background4002689.3 +/- 4271395.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGGTCGTGACCA-
GAGGTCATGACCTC
 A C G T C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A A C G T
T C A G T C G A C A T G A C T G A C G T A G T C T C G A G A C T T C A G T G C A G T A C G A T C G A C T A G T C

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCGTGACCA-
GAGGTCATGACCTC
 A C G T C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A A C G T
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGGTCGTGACCA-
AAGGTCATGACCTT
 A C G T C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A A C G T
C T G A T C G A A C T G C A T G A G C T A G T C C T G A G A C T T C A G T G C A G T A C G A T C A G C T G A C T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGTCGTGACCA-
AAGGTCATGACCTT
 A C G T C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGTCGTGACCA
NHGTCGTGAYDN
 C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

hkb/MA0450.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGTCGTGACCA
GGGGCGTGA---
 C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A
C A T G C T A G A C T G A C T G A G T C A C T G A C G T A C T G G C T A A C G T A C G T A C G T

RTG3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GGGTCGTGACCA
-----GTGACC-
 C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A G T C A C G T

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGTCGTGACCA-
-GAGCGTGACCCC
 C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

hkb/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGTCGTGACCA
GGGGGCGTGANG-
 A C G T C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A
C T A G C A T G C T A G C T A G A C T G A G T C A C T G C A G T A T C G C G T A C A T G A C T G A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGTCGTGACCA---
GGGCGATGACCAYTC
 C T A G C T A G A C T G A C G T A G T C T C A G A C G T A C T G C T G A G A T C A G T C C G T A A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C